Chitinophaga sp. MD30: CK934_10515
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Entry
CK934_10515 CDS
T10354
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
chim Chitinophaga sp. MD30
Brite
KEGG Orthology (KO) [BR:
chim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
chim03016
]
CK934_10515 (truB)
Enzymes [BR:
chim01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CK934_10515 (truB)
Transfer RNA biogenesis [BR:
chim03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CK934_10515 (truB)
Prokaryotic type
CK934_10515 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
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GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ASZ11369
LinkDB
All DBs
Position
2608775..2609458
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AA seq
227 aa
AA seq
DB search
MMQTEQKNIYEEGQVILIDKPLTWTSFDVVRKIRNTTKAKVGHAGTLDPLATGLLICCTG
KMTKEINEYQAQEKEYTGSFTLGAVTPTYDLESAPTDFKDISHIDEAMLKATAVQFTGVL
DQLPPIHSAIKQNGKPIYHLARQGVEVKVEPRRVTITEFEITAIELPLVYFRVVCSTGTY
IRSLAHDFGAALGCGGHLSKLCRTRIGDFKLADAWDMQVFIDQFKKV
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagaccgaacaaaagaatatctatgaggaaggtcaggtgatactgatcgacaag
ccattgacgtggacttcctttgatgtggtacgtaagatcaggaatacaacgaaagccaaa
gtgggacatgccggtacgctggacccgctggctaccggattattgatctgctgtaccggc
aaaatgactaaagagattaatgaataccaggcacaggagaaggagtataccggttctttt
acattgggggcggtaacacctacttatgacctggagtcagcgcctactgactttaaggat
atcagtcatatcgatgaggcgatgctgaaggcgacggcggtgcaattcaccggtgtactg
gatcagctgccgcctatacattctgctatcaagcagaatggcaaacctatctatcacctg
gcccgccagggggtggaagtaaaggtagagccacgccgggtgacgatcacggagtttgag
atcacggcgatcgagttgccgctggtatacttccgtgtggtatgcagcacgggtacttat
atccgctcactggcgcatgattttggcgcagcattgggttgcggtgggcacctgagcaag
ttgtgccgcacgcgtatcggcgatttcaagctggcagatgcctgggatatgcaggtattc
attgaccagttcaagaaagtgtaa
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