Chitinophaga sp. MD30: CK934_11265
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Entry
CK934_11265 CDS
T10354
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
chim Chitinophaga sp. MD30
Pathway
chim03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
chim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CK934_11265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chim03400
]
CK934_11265
DNA repair and recombination proteins [BR:
chim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
CK934_11265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
ATPase_2
AAA_14
AAA_29
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
ASZ14906
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Position
complement(2776446..2779055)
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AA seq
869 aa
AA seq
DB search
MAKSKSEETPLMLQHKAIKDKYPDAVLLFRVGDFYETFNEDAVITAKVLGIVLTKRANGS
ASYVDLAGFPHHALDTYLHKLVKAGYRVAVCDQLEDPKSVKGIVKRGVTEMVTPGVAIND
KLLENASNNFLAAVHFDGEIVGLAFLDISTGEFFAAQGNEEYADKLLQSFKPAEVVYAKP
QQKHFRQVFGTKFYTYALEEWVFTTTYANEVLLKHFETHSLKGFGIEGLSAAIIAAGTTL
HYLRETEHPHLQHITGIQRVDQDDFLWMDRFTVRNLELLNSSVENGYTLLNVLDNTVSPM
GARLLKRWLVFPLRDIAQINERLDAVEYFIRETDLSKALRHHLKQMGDLERLVSKIPLKK
INPREVMQLARALQEAGHIQQLLKDTDNPYLQQLTAKLDPCVAIQDRIMNEVMENPPVLV
NKGNVIREGIHEVLDDLRNISSTSKDHLLRVQQEESEKTGIPSLKVAFNNVFGYYLEVTN
AHKNKVPDTWIRKQTLANAERYITPELKEYEEKIMGAEEKILALEVQLFDNLLQGLQAYI
QPIQQNAQVLARIDCLLCFAHNAVQYKYRRPQLTEGFDLDIKEGRHPVIERGLPAGESYV
ANDILLDKEQQQIIILTGPNMSGKSALLRQTALITLMAHMGSFVPANAAVIGLTDKIFTR
VGASDNLSGGESTFMVEMNETASIINSITPRSLVILDEIGRGTSTYDGISIAWSIVEYLH
DMTTHQPKTLFATHYHELNELENKHARVKNYHITNKESGNKVIFLRKLAPGGSRHSFGIH
VAKMAGMPPQLLERANEVLSHLEEKHIDAPLQQNIKKVANTPARMQLNIFDAHSDTFQQI
REMLTATDINRLTPVEALLKLNEIKELLK
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaagcaaatcagaagaaaccccgctcatgctacagcacaaggccatcaaagac
aaatatcccgatgccgtgctgttattccgtgtgggcgacttttatgaaacctttaacgaa
gatgccgttatcaccgccaaggtgttaggtatcgtactgaccaaacgtgccaatggcagc
gcctcctatgtagacctggcaggttttccacatcatgcgctggatacctacctgcataaa
ctagtcaaggcaggctaccgcgtcgccgtatgcgaccagctggaagatcccaaatcagta
aaaggtatcgtaaaacgaggcgtgacagaaatggtaaccccgggggtcgctatcaatgat
aaacttctggaaaatgccagtaacaacttcctggcagccgtacattttgatggagaaata
gtaggcctggccttcctggatatttctaccggcgagttcttcgcagcacaaggcaacgaa
gaatatgccgacaaactcctgcagagcttcaaacctgccgaagtagtatacgccaaacca
caacagaaacacttccgccaggtattcggtaccaaattttatacgtatgcactggaagaa
tgggtgtttaccaccacttatgccaacgaagtgctgctcaaacattttgaaacccattcc
ctcaaaggattcggcatagaaggtctgtcagctgccatcatagccgccggtactaccctg
cattacctgcgcgaaacagaacatccccacctacaacatatcaccggcatacaacgggta
gaccaggacgacttcctctggatggaccggtttaccgtccgtaacctggaactactgaac
agcagcgtagaaaatggctataccttactcaacgtactggataatacagtaagccccatg
ggcgcacgcctcctgaaacgctggctcgtattcccattgcgggatatcgcccagatcaat
gagcgactggatgcagtagaatatttcatccgcgagacagacctctccaaagcattgcgc
catcacctgaaacaaatgggcgacctcgaacggctagtatccaaaataccactgaaaaag
atcaacccaagagaagtaatgcaactggcccgtgccctccaagaagccggacacatccaa
caactgctgaaagataccgacaacccatacctgcaacaactcacagcaaaactcgacccc
tgtgtagccattcaggaccgtatcatgaacgaagtaatggaaaatccaccagtgctggta
aataaaggtaatgtgatccgggaaggtatccacgaagtgctcgacgacctccggaatatc
tccagcaccagcaaagatcacctgctacgcgtacaacaggaagagtccgaaaaaacaggc
atcccctccctgaaagtagccttcaacaatgtattcggatactacctggaagtaaccaac
gctcacaaaaacaaagtacccgatacctggatacgtaaacagacactagccaacgccgaa
cgatatatcacccccgaactgaaagagtacgaagagaagatcatgggggcagaagaaaaa
atactggcactggaagtacaactgttcgacaacctgctacaaggactacaggcatatata
caacccatacagcaaaatgcccaggtactggcccgcatagactgcctgttatgttttgca
cacaatgccgtacaatacaaataccgccggccacaactgacagaaggatttgacctggat
atcaaagaaggtcgccaccccgtgattgaacggggactgcccgccggcgaatcctatgtc
gccaacgatatcctgctggataaagaacaacaacagatcattatcctcacaggccctaac
atgagcggtaagtcagcattactgcggcaaacagctctgatcaccctgatggcacatatg
ggtagcttcgtacctgccaacgccgccgtaatcggtctcaccgacaaaatattcacccgc
gtaggcgcttccgataacctgagcggcggagaatccaccttcatggtagaaatgaatgaa
acagccagcatcatcaacagcattacaccgcgcagcctcgtaatactggatgaaatcgga
agaggtaccagtacctacgacggtatctccatcgcctggagcatcgtggaatacctccac
gacatgaccacccatcaacccaaaaccttatttgctacccactatcatgagttgaatgag
ctggaaaacaaacatgcacgggtaaaaaactatcatattactaacaaggaatcaggcaat
aaagtaatcttcctccgtaagctggcgccaggaggcagccgccatagcttcggtatacat
gtcgccaagatggccggtatgccgccacaactgctggaacgtgccaatgaagtcctctcc
cacctggaagaaaaacatattgacgcccccttacaacaaaacatcaaaaaggtggcaaat
acacctgcccgcatgcaactgaatatcttcgatgcccacagcgataccttccagcaaata
cgggaaatgctcacagcaaccgatatcaaccgcctgacaccagtagaagcattgctgaaa
ctgaacgagatcaaagaactgttgaaataa
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