Chitinophaga sp. MD30: CK934_14775
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Entry
CK934_14775 CDS
T10354
Name
(GenBank) hypothetical protein
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
chim Chitinophaga sp. MD30
Pathway
chim02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
chim00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CK934_14775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chim03021
]
CK934_14775
Transcription machinery [BR:
chim03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CK934_14775
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_11
GerE
HTH_DeoR
HTH_24
wHTH_Par
HTH_7
HTH_29
HTH_10
DUF2089
HTH_23
HTH_AsnC-type
HTH_17
UPF0122
HTH_28
CFAP300
WHD_HrcA
HTH_40
HTH_38
Sigma70_r3
Cas_TM1802
TFIIE_alpha
Motif
Other DBs
NCBI-ProteinID:
ASZ12132
LinkDB
All DBs
Position
3598656..3599267
Genome browser
AA seq
203 aa
AA seq
DB search
MLGSDSKTGNGEPNRQQSRPHFDEIYELYWKELYEVAYRRLPMAADAEDMLQDLFLSLLK
NPSVIAKEGSIRAYLHKALKGRVIDFYRKSLLKETFESYSALSAAGHTNHPDTYLMHKEL
ETLLEKEIGGMPERMQTVFLMSRKGMLSNEEIAHELNISHQTVRNQISAAIKRIRKALYQ
YNLAHDAGTRMILAVTAVLLTPR
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgctcggatcagatagcaaaacaggcaatggcgaaccaaacagacagcaaagccgccct
cattttgatgaaatctacgaactgtactggaaagaattatatgaagtagcctatcgacgc
ctaccaatggcggcagatgccgaagacatgctgcaagacctgttcttgtcgctgcttaaa
aacccttccgtgatagcaaaagaagggtctatccgcgcttatttacataaagcccttaaa
gggagagtgatcgatttttacagaaaaagcctgttgaaagaaacttttgaaagctattcc
gccctctctgctgcgggtcatactaatcatcccgatacctatctgatgcataaagagctg
gagacactattggaaaaggaaatcggtggtatgccagaacgtatgcaaaccgttttcctg
atgagcagaaaaggaatgctatccaatgaggaaatcgcccatgaactcaatatctcacat
caaaccgtacgcaatcagatcagcgcagccatcaaaaggatacggaaagcactttatcag
tataatctagctcatgacgctggtacacgtatgatcctggctgtcaccgcggtactgtta
accccgcgctga
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