Chitinophaga sp. MD30: CK934_15180
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Entry
CK934_15180 CDS
T10354
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
chim Chitinophaga sp. MD30
Pathway
chim00061
Fatty acid biosynthesis
chim00071
Fatty acid degradation
chim01100
Metabolic pathways
chim01212
Fatty acid metabolism
chim02024
Quorum sensing
chim04146
Peroxisome
Module
chim_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
chim00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CK934_15180
00071 Fatty acid degradation
CK934_15180
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CK934_15180
09145 Cellular community - prokaryotes
02024 Quorum sensing
CK934_15180
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
chim01004
]
CK934_15180
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
chim04147
]
CK934_15180
Enzymes [BR:
chim01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CK934_15180
Lipid biosynthesis proteins [BR:
chim01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CK934_15180
Exosome [BR:
chim04147
]
Exosomal proteins
Exosomal proteins of breast milk
CK934_15180
Exosomal proteins of breast cancer cells
CK934_15180
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ASZ12207
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All DBs
Position
3769924..3771744
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AA seq
606 aa
AA seq
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MNTHPKKRLFDAVGWQLTQFPKDNMLAAKENGTWKTYATATVNEIVNRFSAGLIQLGVSG
NDFTPEGADKIAIISNNRPEWIFTDLAVQQTGAILVPIYPTTSPVELQFILQDAAVKFIF
VSSKELLEKVLSIRSEVPSLKDIYTFDKLDGAKHWSEVPEQATPELLQQVEQLKADIDPE
HLATIIYTSGTTGKPKGVMLTHNNIVSNAMYAKESFPFEDAPNSKVLSFLPLNHIFEKCV
TYIYLFSGISIYYAESMETIGDNLKEVQPDGFTTVPRLLEKVFEKIMATGSSLTGIKKSL
FFWAVSLAGRYDNLNSGGWWYDFQLKIANKLVFSKWRQALGNNVSYIVTGGAACQEKLLR
IFNAAGIPVYEGYGPTENSPVISVNRKEAGGTKFGTVGPPIKGVDVKLAEDGEICVSGTS
VMKGYYKRPDLTAETVIDGWLHTGDIGVWVDNKFLKITDRKKELFKTSGGKYVAPQPIEN
KFKESPFIEQIMVVGAGEKFTGALIVPSFSHLQRWMTQQQIPFKDNAAAIKEPKVLEMYN
QVVNDYNQYFNHVEQIKRFELLPEEWSIAGGEMTPKLSLKRKVVLEKYKDTIAKIYNVPA
EHPQGA
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgcatccaaaaaagagactttttgacgcagtgggctggcaattaacccaattc
cctaaagacaacatgttggcagctaaagagaatggcacctggaaaacatatgccaccgcc
accgttaacgaaattgttaaccgtttcagtgcaggactgatccaactgggcgtaagcggc
aatgacttcacccccgaaggtgccgacaaaatagcgatcatcagcaataatcgccccgaa
tggatatttacggacctggctgtacaacagaccggcgctatattagtaccgatctaccct
acgaccagcccggtagagctgcagttcatcttacaggatgccgcagtaaagttcatattc
gtcagcagcaaagaactcctcgaaaaggtcctgagcattcgcagcgaagtaccttctctc
aaagacatatataccttcgataaattggatggagcaaaacattggtcggaagttcccgaa
caggctacccccgaactactccaacaggtagaacagctaaaagcagacatcgatccggaa
cacctcgctaccatcatctatacctccggtaccaccggcaaacccaaaggagtcatgctc
acgcataacaacattgtctccaatgccatgtatgcaaaagagagcttcccctttgaagat
gcacccaattccaaagtactcagcttcctgccgctcaatcacatctttgagaaatgtgtc
acctacatctacctgttcagtggcatcagcatctactacgcggaaagtatggagacgatc
ggcgacaaccttaaagaagtacaacccgatggctttaccaccgtacctcgcctcctcgag
aaagtgtttgaaaagatcatggccaccggtagcagcctcaccgggattaaaaagtcctta
ttcttctgggcagtatccctggccggcagatatgacaacctcaacagcggcggctggtgg
tacgacttccagctgaagatcgctaacaaactggtattcagtaaatggcggcaggcatta
gggaataatgtcagctatatcgtaacaggtggcgccgcctgccaggagaaactgctgcgc
atctttaacgctgccggcatccccgtatatgaaggatacggccctaccgaaaacagcccc
gtgatcagcgtcaaccgcaaagaagcagggggtaccaagtttggtaccgtaggcccgcct
ataaaaggtgtagatgtgaaactggcagaagatggagaaatatgtgtaagcggtacctcc
gtaatgaaaggatattacaaacgccccgaccttaccgccgaaaccgtaatagatggctgg
cttcacactggcgatatcggcgtatgggtagataacaaattcctcaagatcaccgatcgt
aaaaaagaactctttaaaacaagtggtggtaaatacgtcgccccgcaacctatagaaaac
aaattcaaagaaagcccattcatcgagcagatcatggtagtaggagcaggggagaagttc
accggtgcacttatcgtacctagcttctcacacctgcaacgctggatgacacaacagcaa
ataccgtttaaagataatgctgccgccatcaaagaacctaaagtactggaaatgtataac
caggtggtcaacgattataaccagtacttcaatcatgtcgagcagatcaaacggtttgaa
ctgcttcccgaagaatggagcatcgccggtggcgaaatgacacctaaacttagcttaaaa
cgtaaagtagtattggaaaaatataaagataccatcgcaaagatctataacgtaccggca
gaacatccgcaaggtgcctaa
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