Chitinophaga sp. MD30: CK934_21510
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Entry
CK934_21510 CDS
T10354
Name
(GenBank) cysteine desulfurase CsdA
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
chim Chitinophaga sp. MD30
Pathway
chim00450
Selenocompound metabolism
chim01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
chim00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
CK934_21510
Enzymes [BR:
chim01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
CK934_21510
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
CK934_21510
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Motif
Pfam:
Aminotran_5
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Pyridoxal_deC
Cys_Met_Meta_PP
SelA
ORF239-like
Motif
Other DBs
NCBI-ProteinID:
ASZ13356
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Position
5707870..5709123
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AA seq
417 aa
AA seq
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MTMLADINIPTPALDLDSIRKDFPILDQQVFGQPLVYLDNGATTQKPKIVLDTLEKYYTH
YNSNVHRGVHQLSQQATEAYEHSRITIAEYINAAHAREVIFTKGTTDAINLVAASFSRSV
LKQGDSVIISALEHHSNIVPWQMACEYTGASLKVIPINEKGELRMDQYEALLDDSVRIVS
VAYVSNTLGTINPVKDIIRLAHARNIPVMLDAAQAVQHLHIDVQALDVDFLAFSGHKLYG
PTGIGVLYGKEEWLHKLPPYQGGGDMIKTVTFAKTTYNELPYKFEAGTPDISGAIGLEAA
IKYIKHIGLENIQAWEEQLQTYALEKLQTIKGLRLIGQATHRSGAISFLVDNIHPYDLGE
LLDKQGIAVRTGHHCTEPLMDLFQIPGTVRASITFYNTIEEIDRLVAGIERAAAMLR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgcttgcagacatcaatatacccactcccgctctggacctggacagcatccgg
aaagacttcccgatactggaccagcaagtgttcggccagcccctcgtatacctggacaat
ggcgccaccacccagaagcccaaaatagtactcgataccctcgaaaaatattacacccat
tataatagtaatgtacatcgcggcgtacaccagctgagccaacaggccaccgaagcctac
gaacactcccgtatcaccatcgcagagtatatcaacgctgcacatgcccgcgaagtcatc
ttcaccaaaggcaccaccgatgccatcaacctcgtagccgccagcttcagccgcagcgtc
ctcaaacaaggcgactccgtcatcatctccgccctggaacaccatagcaatatcgtgccc
tggcaaatggcttgcgaatacaccggcgcctcccttaaagtaatccccatcaacgaaaag
ggcgaactccgcatggaccaatacgaagccctcctcgacgactccgtcaggatcgtctcc
gttgcctacgtctccaataccctgggtaccatcaaccccgtaaaagatattatccgcctg
gcacatgcccgcaacatccccgtgatgctcgacgccgcacaggccgtacaacacctccac
atcgacgtacaagcactcgatgtcgacttcctcgccttctccggccataaactatatgga
cccaccggcatcggcgtactctatggcaaagaagaatggctccataaactgcccccctat
cagggcggcggcgatatgatcaaaaccgtcaccttcgccaaaaccacctacaatgaactg
ccctacaagttcgaagctggtaccccggatatctccggcgccatcggactcgaagcagcc
atcaaatacatcaaacatatcggtctcgaaaacatccaggcctgggaagaacaactccaa
acctacgccttggaaaaactccagaccatcaaaggcctccgcctcatcggccaagccacc
caccgctccggcgccatctccttcctcgtagacaatatacatccctacgacctcggagag
ctgctcgacaaacagggcatcgccgtccgcaccggacaccactgcaccgaacccctcatg
gacctcttccagatcccaggcaccgttcgtgcatccatcaccttttataataccatagaa
gagatagaccgcctcgtggccggcatcgaaagagccgccgccatgctgcgataa
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