Chitinophaga sp. MD30: CK934_26445
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Entry
CK934_26445 CDS
T10354
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
chim Chitinophaga sp. MD30
Pathway
chim02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
chim00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CK934_26445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chim03021
]
CK934_26445
Transcription machinery [BR:
chim03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CK934_26445
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
DAO_C
HTH_40
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ASZ14236
LinkDB
All DBs
Position
6988152..6988730
Genome browser
AA seq
192 aa
AA seq
DB search
MEHQVINQLFRRITEQDDQEAFNSFYKLLFLPVLRFSYNYTRSKEIAEEIANDVFLHCWQ
KRKELTNIKNPQVFLFVCAKNRAIDHARKHPSSRQIVSMTELDEQHVRFNSDPEKLLITA
EMMRKVEDAVQQLPPKCRTIFILVKQYGLKYKEVAALQQLSVKTVENQLAIAMQKLTQAV
NFTLEQEMARNA
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atggagcatcaggtaatcaatcagctattcaggaggataacagaacaggacgaccaggaa
gcattcaatagcttctacaaattgctgttcctgccagtactgagattttcctacaattat
acccgctccaaagaaatcgcagaagaaatcgccaacgatgtattcctccactgctggcaa
aaacgaaaagaactcaccaacatcaaaaatccacaggtattcctcttcgtatgcgccaaa
aaccgcgcaatagaccacgcccgcaaacacccctcctccaggcagatcgttagcatgaca
gaactcgatgaacaacacgtccgctttaatagcgatcccgaaaaactgctcatcaccgcc
gaaatgatgcgcaaagtagaagatgccgtacaacaactacctcctaaatgccgcaccata
ttcatactcgttaaacaatatggattgaagtacaaagaagtagccgccctacaacaactc
tccgttaaaacagtagaaaatcaactggccatcgccatgcagaaacttacgcaggcagtc
aacttcaccctcgaacaggaaatggcccgcaacgcctga
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