Chitinophaga sp. MD30: CK934_26900
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Entry
CK934_26900 CDS
T10354
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
chim Chitinophaga sp. MD30
Pathway
chim03030
DNA replication
chim03430
Mismatch repair
chim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CK934_26900 (holA)
03430 Mismatch repair
CK934_26900 (holA)
03440 Homologous recombination
CK934_26900 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chim03032
]
CK934_26900 (holA)
03400 DNA repair and recombination proteins [BR:
chim03400
]
CK934_26900 (holA)
Enzymes [BR:
chim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CK934_26900 (holA)
DNA replication proteins [BR:
chim03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CK934_26900 (holA)
DNA repair and recombination proteins [BR:
chim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CK934_26900 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
HP_1247_M
Motif
Other DBs
NCBI-ProteinID:
ASZ14316
LinkDB
All DBs
Position
complement(7083096..7084091)
Genome browser
AA seq
331 aa
AA seq
DB search
MEYQDIIKDWKQKKFRPLYWLEGEEDFFIDQVSTYAEHELLAEAEKGFNLTVLYGKDTDW
SAVTNACRRYPMFAERQVVILKEAQSMRDLLKLETYIDNPLPSTIFVVAHKQGKLDGRSK
LAKLVKEKGILLSTKKMYDNQLPGWVDAHVNNLGRAITQKACILLVDHIGNDLSRIANEI
EKLLVNLPDGKKIDEGDIEKYVGISKEYNVFELQNATGQKDFGKVMRIIQYFTANPKAAP
IQMTIPALYNYFSKVSMVFAVKGGEKDIASALGVHPFFVKDYIAAARQYGAEGAERAILL
LHQYNLRSIGINDSGVEDGELMKEMMFRIMS
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggaataccaggatattattaaagattggaaacagaaaaaattccgcccactatactgg
ctggaaggggaagaagatttttttatcgaccaggtaagcacctacgcagagcatgagctc
ctcgcagaagcagaaaaaggattcaatcttaccgtactgtatggcaaagataccgactgg
agtgctgttacgaacgcctgcaggcgctaccccatgtttgccgaaagacaagtagtgatc
ctgaaggaagcacaatccatgcgcgacctgctcaaactcgagacctatatcgataatccc
ctgccgtctaccatctttgtcgtagcgcataaacaaggaaaacttgatggacgcagtaaa
ctggccaaactggttaaagagaaaggcatactgctgagtaccaaaaaaatgtatgataac
caattaccaggttgggtggatgcacatgtgaacaacctgggccgggctattacacaaaaa
gcctgtatcctgctggttgatcatatcggtaatgacctctcgcgtatcgctaacgaaata
gagaaattgctggtcaacctgcctgatggtaaaaagattgatgaaggagatattgaaaag
tatgtagggatcagtaaggaatacaatgtatttgaactgcagaatgccaccggccagaaa
gactttggtaaagtgatgcgcatcatccaatactttacagccaaccccaaagcagcacct
atacagatgacgataccggccttgtataattactttagtaaggtgagtatggtattcgca
gtgaaaggaggtgaaaaagacattgcatcagccttgggtgtacatcccttcttcgtgaaa
gactatatagctgccgcccggcaatatggtgcagaaggagcagaacgcgccatcctgctg
ctgcatcagtataacctcaggagcatcggtattaatgatagcggagtggaagatggtgag
cttatgaaagaaatgatgttccgtatcatgagctga
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