Chitinophaga sp. MD30: CK934_27030
Help
Entry
CK934_27030 CDS
T10354
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
chim Chitinophaga sp. MD30
Brite
KEGG Orthology (KO) [BR:
chim00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chim02000
]
CK934_27030
Transporters [BR:
chim02000
]
Other transporters
Pores ion channels [TC:
1
]
CK934_27030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
CarbopepD_reg_2
CarboxypepD_reg
Plug
OMP_b-brl_3
Big_3_5
DUF4198
Motif
Other DBs
NCBI-ProteinID:
ASZ14339
LinkDB
All DBs
Position
7110338..7112716
Genome browser
AA seq
792 aa
AA seq
DB search
MKHFMLIALLFVAGVLHAQTFISGTVTDKKRGQPLPGVAVIVTGNTSGGAHTDGKGHYRI
QVPRNGVYRLQASYLGFRTYSVSVTIQGSSQTQDIVLEETGLFVKPVEISSLRAGKNAPF
TSTTLDKEDIKKQNLGQDLPILLNQLPGVVSNSDAGNGVGYTNMRVRGSDITRVNITVNG
IPINDAESQGAFFVNMPDFASSVSSVQLQRGVGTSTNGAGAFGASLNLSTNEFRDKAYAE
LSNSYGSFNSWKHTVKAGSGLINDHFTFDARLSKISSDGYIDRAGSDLKSFYTSAAYISK
KTAIRLNVFSGKEKTYQAWNGVPQDSLKTHRTYNSAGTDKPGTPYDNETDNYQQDHYQLF
LNQEINTHLNFNVALHYTRGKGYFEQYQAKQAFTDYGLTNPVINNDTIKTTDLVRQLWLD
NHFYGGIFSINSTGKVLNWSLGGGWNKYEGNHYGKIIWAQYAIDKDHRWYDLDALKTDFN
IYWKGEFKITEALRLFTDLQYRRVHYDLGGFRKNPTLFQKNNYNFFNPKVGVYYYLNERQ
QLYASYAVGNKEPNRDDFEAGVKLRPTHETLHNVEAGYSLRGDKISLQANVYYMRYKNQL
VQTGKLNDVGAYTRINIPNSYRLGIEVQGSAVLTPWFTLSVNAALSQNKIRDYTAYYSNE
DTELEETRHYDNTDIAFSPNVVAGHTLSFQPLQQLFIDLAGKYVSRQYMNNSSNVQGSLD
AYYVNDLRVRYTVPQRLFKELGVLVAVNNFTDRKYAPNGATYTSIKNGTVKYSNYYFPMA
GINFMAGVNLSF
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgaaacatttcatgcttattgcgcttttatttgtagcaggtgtgctacatgcgcagaca
tttatctccggtacggttactgacaaaaagagggggcagccgctgcccggcgtagcggtg
attgtcaccggcaacacttcaggcggtgctcatacagacggtaaagggcactaccggata
caggtaccccgcaacggtgtttataggctgcaagcgtcttacctgggattccggacctat
agcgtttcggtgaccatccagggcagtagtcagacgcaggatatcgtgctggaagaaacc
ggtttgtttgtgaagccggtagagatcagcagtctgcgagccggcaaaaatgcgccattt
accagtactaccctggataaggaagatatcaaaaaacagaacctgggacaggatcttccg
atactgctgaaccagctgccgggagtcgtgtccaattcagatgccggtaatggcgtgggg
tataccaatatgcgggtacgtggttcggatattacaagggtaaatattacggtgaacggt
attcctattaacgatgcggaatcgcaaggtgctttctttgtgaacatgcctgactttgcc
tcttctgtgagcagtgtgcaactgcaacggggggtgggcacttctaccaacggcgccggc
gcctttggcgcttcgctgaacctgagtaccaatgaattccgtgacaaggcttatgctgaa
ttgagtaacagctatggctccttcaactcctggaaacatacggtaaaagctggtagcggg
cttatcaacgatcatttcacttttgatgcgcggctctccaagatatcttctgacgggtat
attgaccgtgcaggatcggacctgaaatccttttatacttctgctgcctatatcagtaag
aagacagcaatccgcctgaatgtcttttccggcaaggagaagacctaccaggcatggaat
ggtgtaccacaggactctttgaagacacaccgtacgtataactcagctggtacagataag
ccgggcactccatacgataatgaaacagacaactatcagcaggatcattatcagctgttc
ctgaatcaggagatcaatactcatttaaatttcaacgtagcgttgcactacacccgcggt
aagggctacttcgaacaatatcaagccaagcaggctttcactgactatgggttaactaat
ccggtgatcaacaatgatacgatcaaaacgacggacctggtgagacaactatggctggac
aaccatttttatggcggtatcttttctatcaacagtaccggcaaggtactgaactggagc
ctgggcggtggttggaacaagtacgaaggcaatcactatgggaagatcatctgggcgcag
tatgcgatcgataaagaccaccgttggtatgatcttgatgcgctgaagacggacttcaac
atttactggaagggagaatttaagatcacggaagcattacgtctgttcaccgatctgcaa
tacagaagggtgcattatgacttgggaggattccggaagaaccctactcttttccaaaag
aacaactacaacttcttcaatccgaaggttggtgtttactattacctgaacgaacggcag
cagttgtatgcttcttatgcagtgggtaataaagagcctaaccgggatgattttgaagct
ggtgtaaagctacgtcctacacatgaaaccttacacaatgtggaagccggttattcgctg
cgcggggataaaatatcattgcaagccaatgtgtattatatgcgttataagaaccagctg
gtgcagacaggtaagctgaatgacgtaggcgcctatacgaggatcaatattcccaatagt
taccggctgggtatagaggtgcaaggtagtgcggtattgacgccctggtttaccctgtcg
gtaaatgcggcgttgagtcagaataagatcagggactatacggcctactattccaatgag
gacacagagctggaggagacgcgtcattacgacaatacggatattgccttctctcctaac
gtggtagccgggcatacattgagttttcagcctttacagcagctgttcatagacctggcc
ggcaagtatgtaagtcgccagtatatgaacaacagcagcaatgtacagggcagcctggat
gcttactatgtgaatgacctgcgggtgcgttatacggtgccacaacgcctgtttaaggag
ctgggggtactcgtggcagtgaataacttcacggaccgcaaatatgcgcctaatggcgcc
acttataccagtataaaaaatggaacagtgaaatatagcaattactatttccctatggca
ggcattaatttcatggcaggcgtcaacctgtccttttaa
DBGET
integrated database retrieval system
