Chitinophaga sp. MD30: CK934_28630
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Entry
CK934_28630 CDS
T10354
Name
(GenBank) hypothetical protein
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
chim Chitinophaga sp. MD30
Pathway
chim02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
chim00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CK934_28630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chim03021
]
CK934_28630
Transcription machinery [BR:
chim03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CK934_28630
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
GerE
Sigma70_ECF
HTH_40
Sigma70_r3
HTH_23
HTH_10
ADI
Motif
Other DBs
NCBI-ProteinID:
ASZ14637
LinkDB
All DBs
Position
7492832..7493437
Genome browser
AA seq
201 aa
AA seq
DB search
MDAYNERDIIGRIVAGDEAAFAVFFRRHHPKIYQVGLLLTHSAQQAEELVQEVFMKVWLK
RAQLSVITDVSSWLFIIARNDAFKALQRHSRRQELLQSLAISQDLEDVSHETDDLIIYRN
YHELLGKAISRLSPRQQLVWRLSKEEGLRREEIAARLDIRPDTVKEYLAAATKHIRAYLL
SQQGIKTGVEVLFIWSLYMMQ
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atggatgcatataacgagcgagacatcatcggccgtatcgttgcaggagatgaggcagcc
tttgctgtgtttttccggcgtcatcacccgaagatataccaggtagggctgttgctgaca
catagtgcgcagcaggctgaggagctggtacaggaggtgtttatgaaggtatggctgaag
cgggcacaactatcggttattacagatgtatcttcctggctgtttatcattgcccgtaat
gatgcttttaaagctttacagcgtcatagtcgccggcaggagctgttgcagtcgctggct
atctcgcaggacctggaggatgtctcgcatgagacagatgatctgatcatttatcgtaac
tatcacgagttgttaggcaaggctatcagccgcttatcgccccggcagcagctggtatgg
cggctcagtaaggaagaaggactgaggcgggaagagattgcggcgcggctggatatacgg
cctgacactgtcaaagaatacctggctgcggccaccaaacatataagagcctacctgctg
tctcagcaaggtattaaaacaggtgtagaggtgctatttatctggagcctgtatatgatg
caataa
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