Chitinophaga sp. MD30: CK934_28995
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Entry
CK934_28995 CDS
T10354
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
chim Chitinophaga sp. MD30
Brite
KEGG Orthology (KO) [BR:
chim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chim03400
]
CK934_28995
Enzymes [BR:
chim01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CK934_28995
DNA repair and recombination proteins [BR:
chim03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CK934_28995
Prokaryotic type
CK934_28995
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ASZ14700
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Position
complement(7597815..7599119)
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AA seq
434 aa
AA seq
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MAKTVNLCWLRRDLRLKDQAALYHALKAGVPVVPVFIFDTDILDDLESKDDRRVTFIRDV
LVGMQEELESMGSTLDVFHGTAKAAFTHWLSHYDVQAVYTNHDYEPYARERDADIGKLLE
GKGIAFHTYKDQVIFEKDEVLKDNGEPYTIYTPYSKRWKSLLNDFYLQSYPTKKYFKHFF
QQSPRQIPSLAAMGFKEGERGFPGIQVKGELLSHYDKTRDFPGIKGTTHLGVHLRFGTIS
VRVLARKAMELNDTFLNELIWRDFFMTILWHFPKVVHQSFKADYDKIKWRNNEEEFARWC
EGQTGYPIVDAGMRELNATGFMHNRVRMIVASFLTKHLLIDWRWGEAYFARQLLDYDLAA
NNGNWQWAAGCGCDAAPYFRVFNPTLQTQRFDKELRYVRHWVPELEELTYAKPIVVHEDA
RKRALEAYGKALKG
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaacggtgaatttatgttggttgcggcgtgatctgcggctaaaggatcaggca
gctttatatcatgcattgaaggcaggtgtaccggtagtgccggtatttatatttgacacg
gacatattggatgacctggaatcgaaggacgaccggcgggtgaccttcatccgggatgta
ctggttggtatgcaggaagagctggagtcgatgggtagtacgctggatgtattccacgga
acggcgaaagcggcttttacacattggctgtcgcattatgatgtgcaggcagtgtatacc
aatcatgactatgagccttatgctagggagcgggatgccgatataggtaagcttttggag
gggaaaggtattgcttttcatacatacaaggaccaggtaatatttgagaaagacgaggtg
ttgaaagataatggagagccctatactatttacacaccatatagcaaacgctggaagtcg
ttgctcaatgatttttacttacaatcttatcctactaagaaatatttcaaacactttttt
cagcagtcgccgaggcagataccttcgttggcagcgatgggatttaaggaaggggagcgt
ggatttcccggtatacaggtgaagggtgagttactcagccattatgataagacgagggat
tttccggggattaaggggacgactcatttgggggtgcacttgcggtttggtacgatcagt
gtacgagtgttggccaggaaggcgatggagctgaatgatacttttctgaatgagctgatc
tggcgggatttctttatgacgatactctggcactttccgaaggtggtgcatcagtcgttc
aaggcggattatgataaaataaagtggcggaataatgaagaggagtttgcccgttggtgc
gaggggcagacgggttatccgattgtggatgcgggtatgcgggagttgaatgctacaggg
tttatgcacaatagggtgcgtatgatcgttgcgagttttctgaccaaacatttgttgata
gactggcgttggggggaggcttattttgcgcgtcagttgttggattacgatctggcggcg
aacaatggtaactggcagtgggcggcgggatgtggatgtgatgcggcgccttatttccgt
gtgttcaacccgacgttgcagacgcagcgatttgacaaggagctgcggtatgtgcggcat
tgggtgccggagttggaggaactgacgtatgccaagcctatagtggtgcatgaggacgcg
cgtaagcgtgccctggaggcatatggtaaggcgttaaaaggataa
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