Corynebacterium hindlerae: J5O04_02795
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Entry
J5O04_02795 CDS
T08794
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
chin
Corynebacterium hindlerae
Brite
KEGG Orthology (KO) [BR:
chin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chin03032
]
J5O04_02795 (topA)
03400 DNA repair and recombination proteins [BR:
chin03400
]
J5O04_02795 (topA)
Enzymes [BR:
chin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
J5O04_02795 (topA)
DNA replication proteins [BR:
chin03032
]
Prokaryotic type
DNA Topoisomerases
J5O04_02795 (topA)
DNA repair and recombination proteins [BR:
chin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
J5O04_02795 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
MacB_PCD
Motif
Other DBs
NCBI-ProteinID:
QTH60079
LinkDB
All DBs
Position
605372..608302
Genome browser
AA seq
976 aa
AA seq
DB search
MAESNAGVKRLVIVESATKAKKIQPYLGKDYIVEASVGHIRDLPRGAADVPAKYKKEPWA
RLGVDTDHGFSPLYVVSADKKKKVSDLKAKLKEVDELYLATDPDREGEAIAWHLLEVLKP
KVPVKRMVFNEITKPAILAAAENTRDLDHNLVDAQETRRILDRLYGYEVSPVLWKKVMPR
LSAGRVQSVATRVIVERERERMAFVSANYWDLTAQLKTDQPASAENPNEFAARLTVVDKR
RVAQGRDFNDRGELKGKDVIVIDQAKATQLADALSGTTMTVASVEEKPYTRRPYAPFMTS
TLQQEAGRKLHYTSERTMRIAQRLYENGHITYMRTDSTTLSESGIQAARQQARELYGDKF
VADAPRQYTRKVKNSQEAHEAIRPAGETFATPGQLHAQLDAEEFKLYELIWQRTVASQMA
DARGTSMKVTIAGTATSGEDVEFAATGRTITFPGFLKAYVETSQLEDGRNVADNAEKRLP
QLSKGDALAAQQVDAEGHSTNPPARYTEASLVKKMEDLGIGRPSTYASIIKTIQDRGYVF
SRGNALVPSWVAFAVVGLLEQNFSSLVDYDFTSSMEDELDEIAAGNENRTEWLNSFYFGN
AEVGDKTADSVARLGGLKALVRDNLENIDAREVNSLRLFVDEEGRDIVVRVGRYGPYLER
IVGQLPDGTPEYQRANLPESTTPDELSLDAAEKLFAIPQGGRELGVNPANGRMIVAKDGR
YGPYVSELVTEEEKASVGAHAEEIVAEERAAEDAQRKAEGKRAKNWETKTAANQKEKRIN
QIIEETLKPGTASLFSSMEPATVTLEDALRLLSLPREVGVDPTDGEMITAQNGRYGPYLK
KGSDSRSLANEEQIFTVTLDEARRIYSEPKRRGRSATAAAPLKVLGDNDVSGKPMQVKDG
RFGPYVTDGTTNASLRKGDNPETLTDARANELLSERRAKEAAEGGAPKKTTRKKATKKAA
KKTVKQTTKRVVNARR
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
gtggcagagtcaaatgctggcgtaaaacgcttagtgattgtggagtcggcgaccaaggcg
aagaagatccagccgtatcttggtaaggactacatcgtcgaggcgtccgtgggccacatc
cgtgacctgccacgaggagccgccgacgtgcccgccaaatacaagaaagagccgtgggct
cggcttggcgtggacacagatcacggtttttcgccgttgtacgtggtgagcgcggacaag
aaaaagaaggtctctgacctgaaagcgaagctcaaggaagtagacgagctttacctcgcc
accgaccccgaccgtgagggcgaagcgatcgcgtggcatctgctggaggtgctgaagccg
aaggtgccggtcaaacgcatggtgttcaacgagatcaccaagcctgcgatcctggcggca
gcagaaaacacccgcgacctggaccacaacctggtggacgcgcaggaaacccgtcgcatc
ctcgatcgcctctacggctacgaggtatcccctgtgctgtggaagaaagtgatgccacgc
ctgtctgcggggcgcgtgcagtcggtggctactcgcgtcatcgtggagcgcgagcgggag
cgcatggcgtttgtgtctgcaaactactgggatctcactgcgcagctcaagaccgaccag
ccagccagcgcggaaaaccctaacgaattcgctgcgcggctcaccgtcgtcgataagcgg
cgcgtggcgcaaggccgcgactttaacgaccgcggcgagctcaagggcaaggacgtcatc
gtcattgaccaggcgaaagccacgcagcttgccgacgccctgagcggcacgactatgacc
gtagccagcgtcgaggaaaagccgtacacccgacggccctacgccccatttatgacctcg
acgctgcagcaggaagccggacgcaaactgcactacacctccgagcgcaccatgcgtatc
gcgcagcgcctgtacgaaaacggtcatatcacctacatgcgtacggactccactacgctc
agcgagtccggcattcaagcagcacgccagcaggcacgcgaactctacggtgataagttc
gtggctgacgcgccgcgccagtacacccgcaaggtgaagaactcgcaggaagcccacgaa
gcgatccgcccggccggcgaaaccttcgccaccccaggccagcttcatgcacaactggac
gccgaagagttcaagctctatgagctcatttggcagcgcaccgtcgcctcccagatggct
gacgcgcgtggcacctccatgaaggtgaccatcgccggcaccgccacctccggcgaggac
gtggaattcgccgctaccggtcgcaccatcactttcccaggcttcctcaaggcctacgtg
gaaacctcgcagctcgaagacggccgtaacgtggcagacaacgctgaaaagcgcctgcca
cagctgtccaagggcgatgcactcgccgcgcagcaggtcgacgccgaaggtcactccacc
aacccgccagcccgctacaccgaagcgtccctagtgaagaagatggaagacctcggtatt
ggacgcccatccacctacgcgtccatcatcaagaccatccaggaccgcggttacgttttt
tcccgcggcaatgcgctggtcccgtcgtgggtagcgtttgccgtggtcgggctgctggag
cagaatttcagctccctagtggactacgacttcacctcctccatggaagatgaactcgac
gagatcgctgccggtaatgaaaaccgcaccgagtggttgaacagcttctacttcggtaac
gcggaagtgggcgacaagaccgcagacagcgtggcacgcctcggcgggctgaaagctctg
gtgcgcgacaacctcgaaaacattgacgcgcgcgaagtgaactcgctccgcctattcgtc
gacgaggaaggccgcgatatcgtggtgcgcgtcggccgctacggcccatacctcgagcgc
attgtggggcagctgcccgacggtaccccggaataccagcgcgctaacctgccggaatcc
accaccccagacgagctgtccctggacgccgctgaaaagctcttcgccattccacaaggt
ggccgcgagctcggcgtcaacccagctaacggtcgcatgatcgtagccaaggatggtcgc
tacgggccttatgtctctgagctggtcaccgaggaggaaaaagcttccgtcggcgcgcac
gctgaagaaatcgtcgcagaggaacgcgccgccgaagacgcgcagcgcaaagccgaaggc
aaacgcgcaaaaaactgggaaaccaaaaccgcggccaaccaaaaggaaaagcgcatcaat
cagatcatcgaggaaaccctcaaaccagggaccgcctcgctgttttcctccatggaaccc
gccacagtcaccctcgaggacgccctgcggctgctgtccctcccacgcgaagtgggtgtg
gacccaaccgacggcgaaatgatcactgcccagaacggccgctacggcccgtaccttaag
aaaggcagcgactctcgctccctggccaacgaagaacaaatcttcaccgtgaccctggac
gaagcgcggcggatctactccgaaccaaagcgtcgcggccgtagcgccaccgccgcagcg
ccactcaaggtactcggcgataacgacgtctccggcaaaccaatgcaggtcaaggacggt
cgctttgggccatacgtcaccgacggcaccaccaatgcctccctgcgcaagggcgacaac
cctgaaacccttaccgacgcgcgcgccaacgagctgctgtccgagcgtcgagccaaggaa
gccgccgaaggcggcgcgccgaagaagacgacccgcaagaaggcaaccaagaaggccgct
aagaaaaccgtgaagcagaccacgaagcgtgtggtgaacgcgcggcggtag
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