Corynebacterium hindlerae: J5O04_03710
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Entry
J5O04_03710 CDS
T08794
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
chin
Corynebacterium hindlerae
Pathway
chin03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
chin00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
J5O04_03710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chin03021
]
J5O04_03710
03400 DNA repair and recombination proteins [BR:
chin03400
]
J5O04_03710
Enzymes [BR:
chin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
J5O04_03710
Transcription machinery [BR:
chin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
J5O04_03710
DNA repair and recombination proteins [BR:
chin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
J5O04_03710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
QTH60245
LinkDB
All DBs
Position
777657..778673
Genome browser
AA seq
338 aa
AA seq
DB search
MLISQRPTLTEEYVDEARSRFIIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSVKIDGVL
HEFTTIGGVKEDVSDIILNIKGIVLSSDSDEPVVMYLSKSGEGVVTAGDIQPPAGVEIHN
PDLHIATLNEQGRLDIELVVERGRGYVPATLNAGGGEIGRIPVDQIYSPVLKVSYKVEAT
RVEQRTDFDKLIIDVETKNSISARDALASAGKTLVELFGLARELNTAAEGIEIGPSPQET
EHIAAYGMAIEDLNFSVRSYNCLKRQEIHTVGELAECTESDLLDIRNFGQKSINEVKIKL
AGLGLTLKDAPEDFDPTQIEGYDAETGEFIDFDPEDSE
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgctcatttcacagcgtccaacgctcaccgaggaatacgttgacgaagcacgctctcgc
ttcatcatcgaaccactggagccaggtttcggctacaccctcggtaactcgctgcgtcgt
accctgctgtcttccatccctggtgcagcagtgaccagcgtcaagatcgacggtgtgctc
cacgagttcaccaccatcggtggcgtgaaggaagatgtttccgacatcatcctgaacatc
aagggcattgtgctgtcctctgactctgacgagccagtggtcatgtacctgagcaagtct
ggcgaaggcgtcgtcaccgcaggtgacattcagcctccagcgggtgtggagatccacaac
ccggatctgcacatcgctaccctcaatgagcagggacgcctggacatcgaactggttgtt
gagcgtggccgcggctacgtcccagcaaccctcaacgctggcggtggcgagatcggtcgc
attcctgttgaccagatctactccccagtgctcaaggtcagctacaaggtggaagctact
cgtgttgagcagcgcaccgactttgacaagctgatcatcgatgtcgagacgaagaactcc
atctccgcacgtgatgcccttgcttccgcaggcaagaccctggttgaactgttcggcctc
gcacgcgagctgaacaccgcagccgaaggtatcgagattggcccatctccacaggagact
gagcacatcgcagcctacggcatggctattgaggatctgaacttctccgttcgctcctac
aactgcctgaagcgtcaggaaatccacaccgtcggtgagctcgctgagtgcaccgaatca
gacctgctggatatccgcaactttggccagaagtccatcaacgaggtcaagatcaagctc
gccggcttgggcctgaccctgaaggacgctccggaagacttcgacccaacccagatcgaa
ggctacgacgccgaaaccggcgagttcatcgactttgacccggaagattctgagtaa
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