Corynebacterium hindlerae: J5O04_05015
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Entry
J5O04_05015 CDS
T08794
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
chin
Corynebacterium hindlerae
Pathway
chin03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
chin00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
J5O04_05015
09124 Replication and repair
03420 Nucleotide excision repair
J5O04_05015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chin03021
]
J5O04_05015
03400 DNA repair and recombination proteins [BR:
chin03400
]
J5O04_05015
Enzymes [BR:
chin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J5O04_05015
Transcription machinery [BR:
chin03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
J5O04_05015
DNA repair and recombination proteins [BR:
chin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
J5O04_05015
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QTH60475
LinkDB
All DBs
Position
complement(1057294..1058931)
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AA seq
545 aa
AA seq
DB search
MNFDGPMIVQSDKTILLEIDHPKATEARIALAPFAELERAPEHIHTYRITPLALWNARAA
GHDAEQVVHMLETYSRFPVPQPLLVDIAETMSRYGRVRLHKHPAHGLILESEEPAILAEL
QRHKKIKPMLGAVIDDATIVVHPSERGRLKQELLKVGWPAEDLAGYVDGESHPISLVEKD
WALRDYQQMAAESFWEGGSGVVVLPCGAGKTMVGAASMARAQATTLILVTNTVAGRQWRD
ELLRRTSLTENEIGEYSGEKKEIRPVTIATYQVVTRKTKGEYRALELFDSRDWGLIIYDE
VHLLPAPVFRMTSDLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDLEAQGFIA
TAECTEVRVTMSEAERMTYATAEPADRYRLAASAAGKMTAVRAILRKHAGAPTLIIGAYV
DQLEEIGAELGVPVVEGKTSTAKREKLFEDFRSGALRTLVVSKVANFSIDLPEAAVAIQV
AGTFGSRQEEAQRLGRLLRPKADGGEAHFYTVVSRDTLDAEYAAHRQRFLAEQGYAYRII
DAEDL
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
gtgaactttgacggcccgatgattgtccagtcggataagacgatcctgctggaaatcgac
cacccgaaggcaaccgaagcccgcatcgcgctagccccgtttgctgagctggaacgcgcc
ccggagcacattcacacctaccgcatcaccccgctcgcgctgtggaatgcccgcgctgct
ggccacgacgctgaacaggtcgtccacatgctggagacctattcgcgtttcccagtaccc
caaccgctgctggtggatatcgcggagaccatgtcccgttatggtcgagtgaggctccat
aaacacccagctcacggactgatcctcgagtccgaggagccagctattttggctgagctg
cagcgccacaagaagatcaagccgatgcttggcgccgtgatcgatgacgccacgatcgtg
gtgcacccttccgaacgcggtcgcctcaagcaggagctgctgaaggtggggtggcccgca
gaggacctggcgggctacgtggacggtgaatcgcaccccatctcgctggtggaaaaggac
tgggcgttgcgcgactatcagcagatggccgcggaatccttctgggaaggcggctccggt
gtggtcgtgttgccgtgtggcgccggtaaaaccatggtgggggcagcctcgatggcgcga
gcacaagccacgacgctgatcttggtcaccaacactgtggccggccgccagtggcgcgat
gagctgctacgtcgcacctccctcactgagaacgagatcggcgaatactccggggagaag
aaggaaatccgccccgtcaccatcgccacgtatcaggtggtgacgcgcaaaactaaaggc
gagtaccgggccctggaactgtttgattcccgagactggggcctcatcatctacgacgag
gtccacctgttgccggctccggtgttccggatgacgtcggatttgcagtcccggcgccgg
ttggggctcacggcaactttggtgcgtgaggacggccgggagggcgacgtattctccctc
atcggcccgaagcgctacgacgcaccatggaaggacctggaggcccagggatttatcgct
accgccgaatgcaccgaggtccgtgtgacgatgtccgaggcagaacgaatgacctacgcg
acggcagagccggcggatcgttaccggctcgcggcgtccgctgcggggaagatgacggcg
gtgcgggcgatcctacgcaaacatgcaggggccccgacgctgatcattggcgcgtacgtt
gaccagttggaagagatcggcgccgagctgggcgtgccggtggtggagggtaagacgtcc
actgcgaaacgcgagaagctgtttgaggatttccgcagcggcgctctgcggaccttggtg
gtgtcgaaggtcgccaacttttccattgacttgccggaggctgcggtcgccattcaggta
gcggggacgttcggttcacggcaggaggaggcgcaacggctgggccggttgctccgtccg
aaggctgacgggggcgaggcccacttttacaccgttgttagtcgcgatacgcttgatgcg
gaatacgcagctcaccgccagcgttttcttgccgaacagggctacgcctaccgcatcatt
gatgcggaagatctttag
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