Corynebacterium hindlerae: J5O04_05280
Help
Entry
J5O04_05280 CDS
T08794
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
chin
Corynebacterium hindlerae
Pathway
chin03420
Nucleotide excision repair
chin03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
chin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J5O04_05280
03430 Mismatch repair
J5O04_05280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chin03400
]
J5O04_05280
Enzymes [BR:
chin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J5O04_05280
DNA repair and recombination proteins [BR:
chin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J5O04_05280
MMR (mismatch excision repair)
Other MMR factors
J5O04_05280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
ResIII
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
QTH60524
LinkDB
All DBs
Position
1114838..1117228
Genome browser
AA seq
796 aa
AA seq
DB search
MDSSFGNASPFGGRRPQVSSADAFGSAGDLLDGLNPQQRAAVEHRGVPLLIVAGAGSGKT
AVLTRRIAYLMQQGVHPGQILAITFTNKAAAEMRERVSGLVGPAAERMWVSTFHSTCVRI
LRQQAALIDGLNTNFTIYDSDDSKRLLTMIAKDFELDAKRFTARGLAAAISNHKNELVGP
SEAMNLAGGEPYATTVARVYDEYQRRLRASNAVDFDDLIGEVVFLLKSHPDIAEHYRRRF
RHVLIDEYQDTNHAQYVLVSTLVGRPSDDPHAVPPAELAVVGDADQSIYAFRGATIRNIE
EFEKDYPEARTIVLEQNYRSTQTILSAANAVIAQNENRREKKLWTALGEGEPITGYVADN
EHDEARFVANEIDRLVDNGLNFGDIAVMYRTNNASRALEDVFMRTGIPYKVVGGTRFYER
KEIRDIVAYLRVLDNPGDEMSLRRIINTPRRGIGDRALAFIGVHAQQHGISFDQALIDAA
AGEVNLLGGRGRNAVAQFNELMESLRADARNTVDESTGMPNLGAIVSAVLDATGYKATLE
ASNDPQDGARLDNLNELVSIAREFSSEAANLLAFEDYEPVEGEPLPGSLQAFLERVSLVA
DSDQIPDNDQGVVTLMTLHTAKGLEFPVVFVTGWEDGQFPHLRALADPKELAEERRLAYV
GITRARQRLYLTRAMLRSSWGNPLTNPASRFLGEIPSDLIDWKRVEPSGGGWGAPSWGAP
APSAPVRRSSVPPAPKRSLNKNLQLAVGDRVNHEKYGLGKVQAVSGTGPRATVTIDFGSA
GTVRLMLIGGVPMEKL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggatagcagcttcggaaatgccagcccattcgggggacgtagaccacaggtgagcagc
gcagatgcgtttggatcggcgggggatttgctggacggtctcaatccgcagcagcgggcc
gcggtggagcatcggggggtaccgctgttgattgtggcgggtgcggggtcgggtaaaacg
gcggtgctgacccgacgaatcgcctacctgatgcaacaaggggtgcatccaggtcagatc
ctggccatcaccttcaccaacaaggccgccgcggaaatgcgcgaacgcgtcagtggtctg
gttggcccggcggcggagcggatgtgggtgtccaccttccactccacctgcgtgcggatt
ttgcgccagcaggccgcgcttatcgacggcctgaacaccaatttcacgatctacgacagt
gacgattccaagcgtctcttgacgatgatcgctaaggatttcgagctggacgcgaagcgg
ttcacggcccgtggtttagcagctgcgatctcgaatcacaaaaatgaactggtgggcccc
tccgaggcgatgaacttggcgggcggcgagccctatgccacgaccgtggcgcgagtctac
gacgagtaccagcgccgcctccgcgcctccaacgccgttgattttgatgacttgatcggg
gaagtggtgttcctgcttaagtcgcaccccgacatcgcagaacattaccgccgtcggttc
cgccacgtcctcatcgacgagtaccaggacaccaaccacgcccaatacgtgctggtctcc
acgttggtagggcgcccctcggatgacccacatgcggtcccgcctgcagaacttgcggtg
gtaggcgatgcagaccagtccatttacgcgttccgcggggcgacgatccgtaacatcgag
gagttcgagaaggactacccagaagcccgcaccatcgtgctggagcagaactaccgttcg
acccagacgattctgtctgctgcgaacgcggtgattgcgcagaatgagaaccgtcgtgag
aagaagctgtggaccgcgttgggcgagggcgaacccatcactgggtacgttgccgacaac
gagcacgatgaggcccgcttcgtagccaatgagattgatcgcctggtagataacggtctt
aatttcggcgacatcgctgtcatgtaccgcacgaacaacgcatcgcgcgcgctggaagat
gtgttcatgcgcaccggcatcccctacaaggtggtgggcggcacccgcttctatgagcgc
aaagagatccgcgatatcgtcgcgtacttgcgcgtgttggataaccccggcgacgaaatg
tccctgcgtcgtatcatcaacaccccacgccgaggaatcggcgatcgcgcgctcgcattc
atcggcgtgcacgcgcagcagcacggcatctcctttgaccaggcgcttatcgacgccgcg
gcgggggaggtcaacctgctgggtgggcgtggtcgcaacgcggttgcgcagtttaatgag
ctgatggagtcgcttcgtgcggacgcccggaacacggtggacgagagtacgggcatgccg
aacctaggtgccattgtgtccgcggtgctcgacgccaccggatacaaggccaccctggag
gcgtcgaacgacccccaggacggggcgcgcctggacaacctcaacgagttggtctccatt
gcacgggagttctcttcggaagccgccaacctgctcgcattcgaggactatgagccggtg
gaaggagaaccactaccgggatcgttgcaggcctttttggagcgcgtgtccctggtagcg
gactctgatcagattccagacaacgatcaaggcgtggtgacgctgatgacgttgcacacc
gccaagggcctggaattcccggtggtgttcgtaacgggttgggaggacggacaattccca
cacctgcgggcgttggcagaccctaaggagctggcggaggagcgtcgtttagcgtacgtt
gggattacccgtgcccggcagcgcctgtacctcacccgcgcgatgctgcgcagctcctgg
gggaacccgctgacaaacccggcatcgcggttcctcggggagatcccttccgacctcatc
gattggaaacgtgttgaaccatctggaggtggctggggtgcaccgtcgtggggggctccc
gctccttcggccccagttcggcgctccagcgtgccacccgcaccgaagcggtcactcaac
aagaacctgcagctcgccgtgggggatcgggtcaatcacgagaagtacggattaggcaag
gtgcaggctgtgtccggcaccggaccgcgcgccacagtgaccatcgactttggctctgcc
gggacggtgcggctcatgctcattggtggcgtgccgatggagaagttgtaa
DBGET
integrated database retrieval system
