Corynebacterium hindlerae: J5O04_08865
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Entry
J5O04_08865 CDS
T08794
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
chin
Corynebacterium hindlerae
Pathway
chin03030
DNA replication
chin03410
Base excision repair
chin03420
Nucleotide excision repair
chin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J5O04_08865 (polA)
03410 Base excision repair
J5O04_08865 (polA)
03420 Nucleotide excision repair
J5O04_08865 (polA)
03440 Homologous recombination
J5O04_08865 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chin03032
]
J5O04_08865 (polA)
03400 DNA repair and recombination proteins [BR:
chin03400
]
J5O04_08865 (polA)
Enzymes [BR:
chin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J5O04_08865 (polA)
DNA replication proteins [BR:
chin03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
J5O04_08865 (polA)
DNA repair and recombination proteins [BR:
chin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
J5O04_08865 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J5O04_08865 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_2
DUF1615
TPR_Trm732_C
DNA_pol_lambd_f
DNA_pol_A_exo1
Hydrolase
Motif
Other DBs
NCBI-ProteinID:
QTH60836
LinkDB
All DBs
Position
complement(1842047..1844626)
Genome browser
AA seq
859 aa
AA seq
DB search
MLIDGHSMAFRAFYALPAENFSTSGGQHTNAVYGFLSMLANLLSEEKPDHIAVAFDVGRK
TFRTELFPDYKAQREAAPEEFRGQVEIIEDALNKLGITTIRKENYEADDIIATLATAAKP
LGFETFIVTGDRDSFQLVNDTTTVLYPMRGVSTLHRFTPEAVEEKYGLTPKQYPEFAALR
GDSSDNLPGVPKVGEKTAAKWIQQYHTIDNLVEHADEIKGVAGNNFRERLDQVKMNRTLT
EMVKDLELPVSPDQLAFQPADITEIATTFDELEFGTNLRERILSVINAEATDAPQEVTEL
VVDKQALRDWLPRGPLAVALQGQQLALVDADRHALLVDLAELDEEDSAALAKWLKSEDPK
FFHDAKVAWHALADQGYELDGIAHDTALAAYLVRPGQRTYSLADVYQRHLKKQLAADTDQ
LSLLSDNTELADHAAAVWELAEELTKELQKIEGYELYQSLELPLLSILARMEATGIAVSV
AALEEQRDTFVEMVADEEAAARELAGDPNLNLSSPKQLQVVLFETLGMPKTKKTKTGYST
AAKEIEALAVNHPHPFLDHLLAHREYQKMKTTLDGLIKSVASDGRIHTTFNQTVASTGRL
SSTEPNLQNIPVRTPAGRRIREAFTVGKGYECLLTADYSQIEMRVMAHLSRDPGLIDAYQ
KGEDLHNYVGSRVFDVPVSEVTPELRRRVKAMSYGLVYGLSAFGLAGQLDITPGEAKKIM
EAYFQRFGGVRDYLSKVVEQARKDGYTSTLFGRRRYLPELMSDNRVARENAERAALNAPI
QGTAADIIKVAMIRVDAALKGMKSRMLLQVHDELVLEIAPGELEEVKAIVEREMDGAISL
SVPLEVSAGSGENWDLAAH
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgttgatcgatgggcattcgatggcgttccgggcgttttatgcgcttccggcggagaat
ttttctacctcgggtgggcagcatacgaacgcggtgtatggctttttgtcgatgctcgcg
aacctgctgagtgaggaaaaacccgatcacatcgccgtcgcgttcgatgtgggccgcaag
acgttccgcaccgagctgtttccggactataaggcgcagcgggaggctgctccggaggag
tttcggggccaggtagagatcatcgaggatgcgctgaacaagctgggcattaccacgatc
cgcaaggaaaactacgaggcggacgacattatcgctacgctcgccacggcggcgaagcct
ctcggcttcgaaacgttcatcgtcactggtgaccgcgattccttccagctggtcaatgac
accaccacggtgctgtacccaatgcggggcgtatccaccctgcatcgcttcaccccggaa
gcagtggaagaaaagtatggtctaacacccaagcagtatccggagtttgcggcgctgcgc
ggtgattcctccgataatctgccgggcgtgccgaaggtgggggagaagacggctgcgaag
tggatccagcagtaccacaccatcgataacctggtggaacacgccgatgagatcaagggc
gtggcgggtaacaatttccgggagcgcctcgaccaggtgaaaatgaaccgcaccctcacg
gagatggtgaaggatcttgagctgcccgtcagccccgaccagctagcgttccagcccgcg
gacatcactgagattgccaccacctttgacgaactcgaattcggcaccaacctgcgcgag
cgcatcctttcagtgatcaacgccgaggccaccgacgcaccacaagaagtcacggaactg
gtcgtcgataagcaggcgctgcgggattggctgccacgcgggccgctcgctgtggcgctg
caggggcagcagctggcgcttgtcgacgccgaccgccacgcactcctcgtggacctcgcg
gagctcgatgaggaggactccgcggcgctcgctaagtggctgaaatccgaggaccctaag
ttcttccacgacgcgaaggtcgcctggcacgccctcgctgatcaaggctacgaactagac
ggcatcgcgcacgataccgccctggccgcctacctggtgcggcccggtcagcgcacctac
tccctggcggacgtctaccagcgccacctgaagaaacagctggctgcggacacagatcag
ctgtcgctgctgtccgacaacacagagctcgccgaccatgcagcagcggtgtgggaacta
gcggaagaactcaccaaggaactccagaaaatcgagggctacgagctgtaccaatccctc
gagctgcctctgctgagcatcctggcgcgcatggaagccaccggcatcgctgtgtcggtg
gcggccctggaagagcagcgtgacactttcgtggagatggtcgccgatgaggaagccgcc
gcccgggaattggcaggggatccgaacctgaacctgtcctccccgaagcagctgcaagtg
gtgctgtttgagaccctgggaatgccgaaaaccaagaaaacgaagacgggctactccacg
gcagcgaaagaaatcgaagcgctggcggtcaaccatccgcacccattcctggaccacttg
ctggcccaccgcgaataccagaagatgaaaaccaccctggacgggctgatcaagtccgtg
gcgtccgacgggcggatccacaccacgttcaaccagacggtcgcgtcgacgggccgactg
tcctcgacagagccgaacttgcagaacattccggtgcggactccggcggggcgtcggatc
cgcgaggcgttcaccgtgggcaaagggtacgaatgcctgcttacggccgactactcacag
atcgagatgcgcgtcatggcgcacctgtcccgcgaccccggactgatcgacgcctaccaa
aagggtgaagacctgcacaattacgtgggctcccgcgtgttcgacgtgccggtttccgag
gtcaccccggagctgcgccgccgtgtgaaagccatgtcctacggcctggtctacggcctg
tctgcgttcgggctggcagggcagctcgacatcacccctggcgaggcgaagaaaatcatg
gaggcctacttccaacgcttcgggggggtgcgcgactacctgtccaaggtggtggagcag
gctcgtaaggacggctacacgtccacgctgttcgggcgccgccgctacctgccggaactc
atgtccgataaccgcgtggcccgagaaaacgcggagcgcgccgccctcaacgccccgatc
cagggcaccgcagcggacattatcaaggtagcgatgatccgcgtcgacgccgcgctgaag
ggcatgaagtcccgcatgttgctgcaggtgcacgacgaactcgtgctggagatcgccccc
ggcgagctggaagaagtcaaggccatcgtggagcgggagatggacggcgccatctccctg
tccgtgccgctggaagtctccgcaggctccggggaaaactgggatctagcggcgcactag
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