Chitinophaga sp. XS-30: FW415_00575
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Entry
FW415_00575 CDS
T06207
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
chit
Chitinophaga sp. XS-30
Brite
KEGG Orthology (KO) [BR:
chit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chit02000
]
FW415_00575
Transporters [BR:
chit02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
FW415_00575
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Ortholog
Paralog
GFIT
Motif
Pfam:
SusD-like_3
SusD_RagB
TPR_12
TPR_7
TPR_8
TPR_2
TPR_1
TPR_10
Motif
Other DBs
NCBI-ProteinID:
QEH39444
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All DBs
Position
complement(129361..130737)
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AA seq
458 aa
AA seq
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MKKQHTYYLLACLITILTSCSKDWLEAKTDKSLTVPTTLADFQGMLDNVAMMTNTSTSNG
EIGSDGHFITDISYQNRAKSVFTDSYIWSKTVRYIGSSTGWGRIYERILYCNIILDGLQS
TQFSDRTQNIEYKNIKGQALFQRAISFYEVSRIFAPPYNLNGDNSMPGVILRLTSDITIA
SKRATTQQTYDRILGDLLEAKDLLPDRPDLLTRASKSAVLALLARIYLSMEDYDNALKYS
TEALSIYSTLYDYNNLPATNSNIGRYNAEVIFHAYFSDPFLTSNCLIEKSLYDQYDADDL
RKTRFFRVNASTGNITFKGNYEGTTANLFCGLATDELYLIRAECYARDRNVSNAMEDLNA
LMRKRWDMNVPYPEITATDPEDALRKVLTERKKELILRNVRWSDLRRLNRDPRFAVTLTR
TVDGTTYTLEPNSYKYTFPIPDDIIEQTGIAQNPGWEK
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacaacatacatactacctattggcatgcttaatcacaatactaacatcttgt
tccaaagattggttggaagccaaaacagacaaatctcttactgtgcccactacgctagca
gactttcagggcatgcttgataatgtagctatgatgacaaacacgtcaacctcaaatggt
gaaataggtagtgatggtcattttataacagacattagttaccaaaatagagcgaagagt
gtttttacagatagctatatctggtcgaaaacagtacgttatataggctcctccacaggg
tggggacgaatctatgaaagaatattatattgcaatataatattggatgggctacagtca
acgcagttttcagatcggactcaaaatatagaatacaaaaatataaagggccaagctctt
tttcaaagagccattagtttttatgaagtatcgagaatatttgcacctccctataaccta
aatggggataatagtatgccaggcgttattttaaggctcacttcagatattacaatagcg
tctaaaagagcaactactcagcaaacttatgatcgaattttgggcgacttattagaagct
aaagatttgctacctgacagaccggatctattgacccgggcttcaaaatccgcagtactg
gcattgttagccagaatttatctgagtatggaggattacgacaatgcactcaagtattca
acagaagccctttctatctattcaaccttgtatgattataataatctacctgccaccaac
agcaatattggaagatacaatgcagaggtgatatttcatgcatactttagtgatccattt
ttgacatcaaattgcttaatagaaaagagtttatacgaccaatatgatgctgatgatctt
agaaaaacacgattttttagagtaaacgcgagtaccggcaatattacgttcaagggaaat
tacgaaggcactacagcaaaccttttctgcggattggcgacggacgaattgtacttaatt
agagccgagtgttacgctcgtgacagaaatgttagcaatgctatggaagatctcaatgca
ctcatgaggaaaaggtgggatatgaatgttccttatcccgagattactgctactgatcca
gaagatgcacttcgaaaagtattgacagagcgaaaaaaggaactcattctccgcaacgtg
cgttggagcgacttacggcgtctgaatcgtgatccgcgttttgccgttacgcttacccgt
acagttgacggaactacttatacgctggagcctaatagctacaaatacacctttcctatt
ccggacgatataattgagcaaacgggtattgcgcaaaatccgggctgggaaaaatag
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