Chitinophaga sp. XS-30: FW415_00910
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Entry
FW415_00910 CDS
T06207
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
chit
Chitinophaga sp. XS-30
Pathway
chit03030
DNA replication
chit03430
Mismatch repair
chit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FW415_00910
03430 Mismatch repair
FW415_00910
03440 Homologous recombination
FW415_00910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chit03032
]
FW415_00910
03400 DNA repair and recombination proteins [BR:
chit03400
]
FW415_00910
Enzymes [BR:
chit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FW415_00910
DNA replication proteins [BR:
chit03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FW415_00910
DNA repair and recombination proteins [BR:
chit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FW415_00910
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DUF8439
DNA_pol3_gamma3
DNAX_ATPase_lid
RuvB_N
AAA_22
DUF8493
AAA_5
AAA_14
AAA_30
AAA_2
RCF1-5-like_lid
AAA_7
Rad17
NTPase_1
AAA_18
RNA_helicase
AAA_16
AAA_19
AAA_33
Mg_chelatase
nSTAND3
AAA_24
SKI
Pribosyl_synth
Motif
Other DBs
NCBI-ProteinID:
QEH39507
LinkDB
All DBs
Position
217508..219526
Genome browser
AA seq
672 aa
AA seq
DB search
MENFIVSARKYRPQNFSTVVGQAHITTTLKNAIRNNQLAHAFLFCGPRGVGKTTCARILA
KTINCENLQADGEACNSCNSCRTFNEGSSFNIHELDAASNNSVDDIRTLVDQVRFAPQAG
KYKIYIIDEVHMLSSSAFNAFLKTLEEPPSYAIFILATTEKHKILPTILSRCQIFDFKRI
TIQDTVDHLQEIVTKENMTAEGDALHLIAQKTDGCMRDSLSTLDKIVSFTGGKLTYQNTL
EHLNILDYDYYFRVMEAVATQDVAGALLIFDEILQKGFEGDNFLGGWAEFLRNLLVCKDD
KVLHLMEVSANLKDRYRQMSGRVSAAYLVTALHLLNETEIGYRMARNKRLHVEMALIRLC
YLQQAVTLVSNDQSGEVVKKNLIPEGTPQRLRAPLPQPIYGKPATTKTITPEAPRLTIES
GAMPPGNAVAQDNAGLPGQQRHGAGTGQTAGTGSSGQQQHAATPANAEARQTAGTNPSGQ
QQYTPVSGTGSTAPQQTAGTTSAGNTQPATPRPATTTPATKLTGLAAMKEALAAKQQTET
VQSNAIPMTAGALAVYWDEFIDKFRQANKMTVVSNLQLAQTVLLGPEEIGIISRNIVQFR
FMEEEKLEISEFFKKKFRNNALVLTLQLDENQQQVTDTGPAPLTSREQFARMMEKYPLVK
ELKDRLNMELDF
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggaaaattttatagtatccgcccggaaataccgtccgcagaacttctccacggtagta
gggcaagcccatataacaacaacattaaagaatgccatccgcaacaatcagctggcacat
gccttcctgttctgcggtccccgcggcgtcggtaaaaccacctgcgcccgcatcctggca
aagaccatcaactgcgagaacctgcaggcagacggagaagcctgcaactcctgcaactcc
tgccggaccttcaatgaaggcagctctttcaatattcatgagctggatgccgcttccaac
aactcggttgacgatatccgcaccctggtagaccaggtgcgcttcgctccgcaggcaggc
aaatacaagatctatatcatcgatgaggtgcacatgctcagctcctcggcattcaatgct
tttctgaaaacgctggaggaaccgccctcctacgccattttcattctggctaccacggaa
aagcacaagatattgcccaccatcctcagccggtgccagatatttgatttcaagcgcata
accatacaggatacggtagatcaccttcaggagatcgttaccaaggaaaatatgaccgcc
gaaggcgacgcccttcacctgatcgctcagaagacggacggctgtatgcgcgattcgctc
agtacgctggacaagatcgtgagcttcaccggcggcaaactgacctaccagaatacgctg
gaacacctcaatatcctggactacgactattatttccgggtgatggaagccgtagcgacc
caggatgtggccggcgccctccttattttcgacgagatcctgcaaaagggctttgaaggc
gataatttcctgggcggatgggcggagttcctgcgtaacctgctggtttgcaaagatgat
aaagtgctgcacctgatggaagtaagcgccaacctgaaagaccgctaccgccagatgagc
ggccgcgtcagcgctgcttacctggtgacggcccttcacctgctgaacgagaccgagatc
ggctaccgtatggcacgcaataaacgcctccatgtggaaatggccctcatccgcctttgc
tatctgcaacaggccgtcacgctcgtcagcaacgaccagtccggcgaagtggtaaaaaaa
aacctgatccctgaaggtaccccgcagcgcctccgggcgccgctgccgcaaccgatatac
ggtaaacccgccaccaccaaaactatcactccggaagccccgcggctgacgatagaatca
ggcgccatgccaccgggaaatgcagttgcgcaggataacgccggcctgccagggcaacag
cggcacggtgcaggcaccgggcaaactgcaggaactggctcatccggtcaacagcaacat
gccgcaacacccgccaacgcggaagccaggcaaactgccggaacaaacccatccggtcaa
cagcaatatacgcccgtctccggaacaggcagcaccgctccgcagcaaactgccggaaca
acatcagccggcaacacccaaccggcaacgccacgtcccgcaacaacaacacccgccact
aaacttaccggcctcgctgccatgaaagaggcactggcagccaaacaacagaccgaaacc
gtccagagcaacgccattcccatgaccgcaggggctttggccgtatattgggacgaattc
atcgataaattccgccaggccaataaaatgaccgtggtgagcaatctccagctggcacag
accgtattgctgggccctgaagagatcggcatcatcagccggaacatcgtccagttccgc
ttcatggaagaagagaaactggagatatccgagttcttcaaaaagaaattccggaacaat
gccctcgtgctgaccctgcaactggacgagaatcagcaacaggtaacagacaccggtcca
gccccgctgaccagccgggaacagtttgcccgtatgatggaaaaatacccgctggtgaaa
gagttgaaagacagactgaatatggaactggacttttag
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