KEGG   Chitinophaga sp. XS-30: FW415_01300
Entry
FW415_01300       CDS       T06207                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
chit  Chitinophaga sp. XS-30
Pathway
chit02020  Two-component system
Brite
KEGG Orthology (KO) [BR:chit00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    FW415_01300
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:chit03021]
    FW415_01300
Transcription machinery [BR:chit03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     FW415_01300
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_23 LAP1_C
Other DBs
NCBI-ProteinID: QEH39576
LinkDB
Position
complement(325271..325867)
AA seq 198 aa
MRSNAYHISEEPPVELQHIADGDERAFRRLFQYYSPRLNQFAWSIVKIKEAAAEIVDDVF
IRLWKQREKVSSISNIRVYLYVAVKNSALNYLSSRANRQITEPFNHVDIALSHDMAPDQK
MISAELQQRIASAVESLPPRCKMIFKLVREDGLRYKDVAEILNLTVNTVDAQMVIAVKRI
SEKVQAHFTAFPKKAVRK
NT seq 597 nt   +upstreamnt  +downstreamnt
atgaggagcaatgcatatcatataagcgaggagccgcctgtggagcttcagcacatcgct
gatggtgatgaacgggcgttccgccggttgtttcaatattatagcccccgcctcaaccag
tttgcctggtccatcgttaaaataaaagaagcggccgctgaaatcgtggacgatgtattc
atcaggttatggaaacaaagggaaaaggtatcctccatctccaatatccgcgtgtacctc
tatgtggccgtaaagaacagcgcgcttaattacctttcttccagggccaaccggcagatc
acggaacctttcaaccatgtggacatagcgctgagccacgacatggcgccggaccagaaa
atgatcagcgccgaactgcagcaaaggatcgcctccgcagtggaatccttgccgcccagg
tgcaagatgatcttcaagctggtgcgggaagacggcctccggtacaaggatgtggccgag
atactcaacctcaccgtaaataccgtagacgcccagatggtgattgctgttaaacgcatc
tctgaaaaggtgcaggcgcattttaccgctttccccaaaaaagcggtcagaaaataa

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