Chitinophaga sp. XS-30: FW415_01300
Help
Entry
FW415_01300 CDS
T06207
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
chit
Chitinophaga sp. XS-30
Pathway
chit02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
chit00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FW415_01300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chit03021
]
FW415_01300
Transcription machinery [BR:
chit03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FW415_01300
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
LAP1_C
Motif
Other DBs
NCBI-ProteinID:
QEH39576
LinkDB
All DBs
Position
complement(325271..325867)
Genome browser
AA seq
198 aa
AA seq
DB search
MRSNAYHISEEPPVELQHIADGDERAFRRLFQYYSPRLNQFAWSIVKIKEAAAEIVDDVF
IRLWKQREKVSSISNIRVYLYVAVKNSALNYLSSRANRQITEPFNHVDIALSHDMAPDQK
MISAELQQRIASAVESLPPRCKMIFKLVREDGLRYKDVAEILNLTVNTVDAQMVIAVKRI
SEKVQAHFTAFPKKAVRK
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgaggagcaatgcatatcatataagcgaggagccgcctgtggagcttcagcacatcgct
gatggtgatgaacgggcgttccgccggttgtttcaatattatagcccccgcctcaaccag
tttgcctggtccatcgttaaaataaaagaagcggccgctgaaatcgtggacgatgtattc
atcaggttatggaaacaaagggaaaaggtatcctccatctccaatatccgcgtgtacctc
tatgtggccgtaaagaacagcgcgcttaattacctttcttccagggccaaccggcagatc
acggaacctttcaaccatgtggacatagcgctgagccacgacatggcgccggaccagaaa
atgatcagcgccgaactgcagcaaaggatcgcctccgcagtggaatccttgccgcccagg
tgcaagatgatcttcaagctggtgcgggaagacggcctccggtacaaggatgtggccgag
atactcaacctcaccgtaaataccgtagacgcccagatggtgattgctgttaaacgcatc
tctgaaaaggtgcaggcgcattttaccgctttccccaaaaaagcggtcagaaaataa
DBGET
integrated database retrieval system