Chitinophaga sp. XS-30: FW415_03385
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Entry
FW415_03385 CDS
T06207
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
chit
Chitinophaga sp. XS-30
Brite
KEGG Orthology (KO) [BR:
chit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chit02000
]
FW415_03385
Transporters [BR:
chit02000
]
Other transporters
Pores ion channels [TC:
1
]
FW415_03385
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
CarbopepD_reg_2
Plug
CarboxypepD_reg
CooC_C
CILP
Motif
Other DBs
NCBI-ProteinID:
QEH39957
UniProt:
A0A5B9WH90
LinkDB
All DBs
Position
818902..821853
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AA seq
983 aa
AA seq
DB search
MINMRLLKALLFCPFLFLATGLLAQTKNVSGKIMDDTGAPIPGATVQAKGSTSGTVSGPD
GVFKLSVPASATTLVVTFIGYATQNVDITGKTEITITLQPENTTLTDVVVVGYGVARRKD
LTGAVASLKSKDFNKGITNAPDQLIQGKVAGLMVVNNNGAPGAATTVRIRGVASVRSGNQ
PLYVIDGVPLDGRVARPNINANGLGQTPDANPLNFVNAADIASMEVLKDASATAIYGSRG
SNGVIIITTKKGQTGPAKLDFAYSVGMSSIMKQLKVLNAEEYRGALQKYGLSGGDNGGSS
DAMKEILRTGVTQNFNVGISGGNENGKYRASFGLMNQEGIVRKSGLKKYTGNLSGQFKFL
DNKRLGLDFSLMAAQTAEQLAPITNNAGFMGSLVGQALQWNPTMPIRNANGTLNILGESA
PVNPLAMSEAWDDKADISYILGSISPYYKITDDLEYRFLFSVNRQTGIRRAQISSWINIP
GVRDLGQAYYGNAELTTKLFTHTLSYNKQITSALNLNAVVGYEYQDFQFKGVDLGAMGFS
SDALPYTSILQNAIQSNTFLSSYDNPKSELQSVFGRVTANLHDKYLLTATLRADGSSKFG
SNNKYGYFPSFAAKWNLHNEGFLKGSSFFQQLGLRAGWGITGNQEFPAGAAQEQYALGAG
GAAALNNVANPDLKWERSSQLNAGIDFAMLGSRISGSVDYFYKKTSDLLFNFPAIQPAPA
SNYWINLPGEVINSGVELAVRGDIIRNRDFSWMLGVNATFLKNELQNYNGPNVLTGAISG
QGVSGATVQRFANGQPLNVFYVRKFLGFDKDGQGLYENDGNTMYYAGDPNPKQMLGLSTE
LNYKKWFLSMNFNGAFGHVVYNNTANTVLPINNLGSRNIAKALLNTEEDLSNPITTSDRY
LEKANFMKMTNATLSYNLGNIGNVFKNVNLYLTGQNLFVITKYSGFDPEVNTDKNVNGVT
SFGIEYSPYPTARNVIFGLNLSL
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacatgcgactacttaaagcgctgcttttctgtccgttcctgttcctggcaacc
ggacttttagcccagacaaaaaatgtttccggtaaaattatggacgatacgggtgcgccc
attcccggcgctaccgttcaggccaaaggctccacctcgggaacggtttccggccctgac
ggcgttttcaaactatccgtaccggcttcggccactaccttggtggtgaccttcatcggt
tatgccacacaaaacgtggacattaccggcaaaactgaaataaccataaccctccagccg
gaaaacaccacgctgacagatgttgtggtagtgggctatggcgttgcccgcaggaaagac
ctcaccggcgcagtggcgtccctcaaatccaaagacttcaacaaaggcatcaccaacgcc
cctgaccagctgatacagggcaaggtagcgggactgatggtggtgaacaataacggcgct
ccgggtgcggcaaccacggtgcgtatccgcggtgtggcctccgtccgctcgggcaatcaa
cccctttatgtgatcgacggcgtaccgctggacggccgcgtggcccggcccaatatcaat
gccaacggcctcggacaaaccccggacgccaacccgctcaattttgtgaacgcggcggac
atcgcttccatggaggtgctgaaagatgcttcggccacggccatttacggctcccgcggc
tccaatggcgtgatcatcatcaccaccaaaaaaggacagaccggtcccgctaaactggat
ttcgcctacagcgtgggcatgagcagcatcatgaaacagctgaaagtgctgaacgcggag
gaataccgcggcgcactgcagaaatacggcctctcaggcggtgataacggcggcagcagc
gatgcgatgaaagagatcctccgcacgggcgttacccagaacttcaatgtgggcatcagc
ggcggtaacgaaaacggtaaataccgtgcctccttcggcctgatgaaccaggaaggcatc
gtccgcaagtccggcctgaaaaaatataccggcaacctctccggacagttcaaattcctg
gacaataaacgcctggggctggacttttccctcatggcggcacaaacagcggaacaactg
gcgcccatcaccaataacgcgggattcatgggcagcctcgtaggccaggcgctgcaatgg
aaccctaccatgcccatccgcaacgccaacggcacgctcaacatcctcggggaaagcgcg
ccggtcaatcctctcgccatgtccgaagcctgggacgataaagcggatatctcctatatc
ctcggcagcatctctccgtactacaagatcacggacgacctggaataccgtttcctcttt
tccgtcaaccggcaaacgggtatccgccgcgcgcagatcagctcctggatcaatatcccg
ggggtaagggacctgggccaggcctactacggcaacgcggagctaaccacaaaactgttc
acccataccttaagctataacaaacagatcacatcggccctgaacctcaatgcagtggtg
ggctatgagtaccaggacttccagttcaaaggggtggacctcggcgcgatgggcttttca
tcggatgcgctgccttacaccagcatcctgcagaatgccatccagtccaataccttcctc
tcctcttacgataacccgaaatccgaactgcagtccgtcttcggccgggtaacggcgaac
ctgcacgacaagtacctgctcacggctactttgcgggcggatggctccagcaaattcggc
tctaacaataaatacggctatttcccgtcctttgcggcgaagtggaacctccacaacgag
ggcttcctcaaaggcagcagtttcttccagcaactgggcctccgcgcgggatggggcatc
acgggcaaccaggagttcccggccggtgcggcgcaggaacaatatgccctgggagccggt
ggcgcagcggcgctgaacaacgtagccaatcctgacctgaaatgggaacgctccagccag
ctgaatgcgggtatcgactttgccatgctgggcagccgcatctccggcagtgtggactat
ttctacaaaaaaacatccgacctgctgttcaatttcccggccatccagccggcgccggct
tccaattactggatcaacctgccgggcgaagtgatcaactccggcgtggagctggcggtg
cgcggtgatatcatccgcaaccgggacttttcctggatgctgggcgtgaatgccactttc
ctcaaaaatgagctgcaaaactataacggtccgaatgtgctcaccggcgccatcagcggt
cagggggtttccggcgctaccgtgcagcgctttgccaatggacagccgctgaacgtgttc
tatgtgcggaagttcctgggtttcgacaaagacggacagggattgtatgagaacgatggc
aataccatgtattacgccggcgacccgaacccgaaacagatgctgggcctctctacggaa
ctgaattataaaaaatggttcctgtccatgaacttcaacggcgctttcggccatgtggtg
tacaacaacacggccaataccgtattgccgatcaacaacctcggctcccgcaacatcgcg
aaggcattgctgaatacggaagaggatctttccaatcccatcaccacttcggaccgctac
ctggaaaaagccaattttatgaagatgaccaatgccaccctcagctataacctgggcaac
atcggcaacgtcttcaaaaacgtcaacctctatctcaccggccagaacctgttcgtgatc
acgaaatattccggcttcgatccggaagtgaataccgataaaaatgtgaatggcgtaacc
tctttcgggatcgaatactccccgtatcccaccgcgcgcaacgtcattttcggcctgaac
ctgtcactgtaa
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