Chitinophaga sp. XS-30: FW415_03690
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Entry
FW415_03690 CDS
T06207
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
chit
Chitinophaga sp. XS-30
Brite
KEGG Orthology (KO) [BR:
chit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chit02000
]
FW415_03690
Transporters [BR:
chit02000
]
Other transporters
Pores ion channels [TC:
1
]
FW415_03690
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CarbopepD_reg_2
CarboxypepD_reg
STN
TTR_TEN1-4
CooC_C
FecR_C
Big_1
MetallophosN
Motif
Other DBs
NCBI-ProteinID:
QEH40012
UniProt:
A0A5B9WHA5
LinkDB
All DBs
Position
complement(892302..895598)
Genome browser
AA seq
1098 aa
AA seq
DB search
MILFPRAKGSTMPLINRLLSIMKLAVFLTFITVLQVAAASHAQTVTLNARDLPLTSVMES
IQEQTGYLFFLKGEKLAGMRVSASIKNVPLRKAMDVLTHDLGLEWVITEQTIVLRPARRS
AGGQGQDIPDPFQQERTVSGRVTDEEGMPLIGVTVVIKGSMKATNTDEEGRYRIAVQDDK
AVLLFSMVGFEPRELAAGPRDTVNVTMKVAISGLNEVVVVGYGTQTRANVTGAISSVKAE
QLNKMPTTSISEMLRGAAPGLQVTMGSAAPGGTSSILIRGRRSLSAGNDPLYIVDGVPSA
SIDDVNANDVASVEILKDASAQSIYGARAANGVILITTKRGISGKTKVNVNTYAGVQNLY
RNFEFYDGEQWAAYRKEAFYNAYGYYNEDEALRGLMKDVYHSKEYIDWEDVMLSPAWQNK
NDVLIQSGNDKTKYALSLGHFFQDGIVPSSNFRRFTGRLNVDQQLSEKISLGANIAYTRS
DRKIADGTFNSFITMPPLAEVYNSDGSLREDVTEAGESHFNPLWNNQHAKNLTITDRLNL
NFIADWKIVKGLSYRLNASINTRTVQENAYLGIQHTVGRNNAGRAMVAQSIYTDYLVENI
LNYTKDIGKHHLDGTAMASLNGIQWKRTGNTGFGFANDDLAYHAIASALSHAVPVYEFSD
RKLLSYLVRGRYNFDSKYMLTLAMRVDGSSVFGANNKYGYFPSAAVAWRINSEDFMAGSE
WISDLKLRLSYGQVGNQGISPYTTLGLADKYLTEFGDQTAVGYLPNSELTNPNLKWETST
SANLGIDYGFFKNRIYGSVEFYDTETTDLLVEKSLSTTSGYASQLVNLGRVRNRGIEFSL
NAVPVRNKDFTWNVGVNFSTNRNRIERINGAVDAQGNPVNDLNNRWFIGQSMNVYYDYQF
DGIWQLDDDIAGSAMPAATPGSIRVNDLNGDKVISVDDRRIIRRDPKLISAFITSFEYRN
FSLSLDINALHGGYLYNAYLATFETGGDLTGKRNGVRRNYWTVHNPSNEAPAPNFVQQPA
FLTSLAYEKADHIRLRNVSLSYNLPEKVISGLKLSNLRLFFTASNIWTLTDVQGYGPEQN
PGDYPEPRTLLFGLNCSF
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgattttgtttccacgtgccaaaggcagtactatgcctttgatcaaccgactattgtca
attatgaaactagcagttttcctgacgttcatcaccgtactgcaggtagccgcggcaagt
cacgcacagactgttactttgaatgcccgtgatttgcccctgaccagcgtaatggagagt
atccaggaacagaccggatacctgtttttcctgaaaggggaaaaactggccgggatgcgc
gtaagcgccagcatcaaaaacgttccgctccggaaagcgatggatgtgttgacccatgac
ctcggactggaatgggtcatcacggagcagaccatcgtgctgcgtcccgcccggcgttct
gccggcgggcagggccaagatatcccggatccctttcaacaggaacgcactgtttcaggc
agggtgacggatgaggaaggaatgccgcttatcggcgtaaccgtggttataaagggcagc
atgaaggccaccaatacagatgaagaaggccgttaccggatcgccgtgcaggacgataaa
gcggtattgctgttctccatggtggggttcgagcccagggagctggccgccggtccccgg
gataccgtcaacgtaaccatgaaagtggccataagcggcctgaatgaagtagtggtggta
ggttacggcacgcaaaccagagcgaatgttaccggcgctatttcctcggtgaaagcggaa
cagctgaataaaatgcctacaaccagcatcagcgaaatgctgcggggggccgcaccggga
ctccaggtgacgatggggagcgccgcgccgggaggcacgtccagtatcctgatcaggggc
aggcgctcactgtcggcggggaatgatccgttatatattgtggacggtgtgccttccgcc
agtattgatgatgtcaatgcgaacgatgtggcttccgtagagatactgaaagatgcttcc
gcccaatcgatctacggcgccagggccgccaacggtgttattctgatcaccaccaaaaga
gggatctccggaaaaacgaaagtgaatgtgaacacctatgccggtgtgcagaacctgtac
aggaactttgaattttatgacggggaacagtgggcggcctacagaaaagaagcgttctac
aatgcatatggctactacaatgaagatgaagcgctcagaggattgatgaaggatgtttat
cattcaaaggaatatatcgactgggaagatgtgatgctgagcccggcctggcaaaacaag
aatgatgtactgatacaatcgggaaacgataaaacaaaatatgcactgtctctcggacat
tttttccaggatgggatcgttccttcttccaacttcaggaggtttacgggcaggctcaat
gtagatcagcaactatctgaaaagatatcattgggagcaaatatcgcctatacccggtcg
gaccggaagattgccgatggcaccttcaattctttcattaccatgcctcccctggccgaa
gtgtacaacagtgatggttcgctgcgggaagatgtgacggaagcgggggaatcccatttt
aatcctttgtggaacaaccagcatgcaaaaaatcttaccatcaccgaccggcttaatttg
aattttatcgcggactggaagatcgtaaaaggcttgtcgtaccggcttaatgcaagtata
aatacaaggaccgttcaggaaaacgcctacctcggcatccagcatacggtaggcaggaac
aatgccggacgggcaatggttgcgcaaagcatttacaccgattatctggtggaaaatatt
cttaactatacaaaggatataggaaagcaccatctggatggcaccgccatggccagcctg
aacggcatccagtggaaacggaccggtaatacgggcttcggtttcgctaacgatgatctg
gcttatcatgccattgcttcagcgctttcccacgccgtgcccgtatatgagttttccgac
aggaaacttctttcctacctggtcaggggccgttacaacttcgacagcaaatacatgctc
acattggctatgcgtgtggacgggtcctccgttttcggcgccaataataaatatggctac
tttccatcagccgcagtagcatggcggatcaacagcgaagattttatggccggcagtgaa
tggatatcagacctgaaactccgcttaagttatggccaggtgggcaaccagggcatcagt
ccatataccacactggggctggcggataaatacctgaccgagttcggggaccagaccgcg
gtgggatacctgcccaattcagaattgacgaacccgaacctgaagtgggaaacgtccacc
tccgccaatttaggtatcgactatggctttttcaaaaaccggatctacggttccgtggaa
ttttacgataccgaaacaacggacctgctcgtggaaaaatcgctgtcaaccacttccgga
tatgccagtcaattggtgaaccttggccgtgtgcggaatagggggatagaattctccttg
aatgcggttccggtaaggaataaagattttacctggaacgtgggggtgaatttttctacc
aacaggaacaggattgaaaggatcaacggcgcagttgatgcgcagggcaatcccgtaaac
gacctgaacaacaggtggttcattggccagtccatgaacgtgtattatgattaccagttc
gatggtatctggcaattggatgatgacatcgccggatcggccatgccggccgccacgccc
gggagcatccgcgtgaacgatctcaacggcgacaaagtcatctctgtagacgaccgccgc
atcatcagaagagatcctaaactgatcagcgcttttattaccagttttgagtacaggaac
ttcagtctttccctggatattaatgctttgcatggcggttatctgtacaatgcttatctc
gccacttttgaaacgggaggcgatcttaccgggaaacgaaacggggtcaggcgcaattac
tggacggtgcataatccctccaatgaagcgccggcgcccaattttgtgcagcagcccgct
tttttaacttcgctggcctatgaaaaagcagatcacatacgcctccgcaatgtttctctt
tcctacaatttgccggaaaaggtgatcagcgggttgaaactcagtaacctgaggttgttt
ttcaccgccagcaatatctggacccttacagatgtacagggctatgggcctgaacaaaat
cccggcgattatccggaaccaagaaccttgttgtttggccttaattgctcattctaa
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