Chitinophaga sp. XS-30: FW415_04855
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Entry
FW415_04855 CDS
T06207
Name
(GenBank) hypothetical protein
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
chit
Chitinophaga sp. XS-30
Pathway
chit03030
DNA replication
chit03430
Mismatch repair
chit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FW415_04855
03430 Mismatch repair
FW415_04855
03440 Homologous recombination
FW415_04855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chit03032
]
FW415_04855
03400 DNA repair and recombination proteins [BR:
chit03400
]
FW415_04855
Enzymes [BR:
chit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FW415_04855
DNA replication proteins [BR:
chit03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FW415_04855
DNA repair and recombination proteins [BR:
chit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FW415_04855
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
QEH40235
LinkDB
All DBs
Position
complement(1154868..1156004)
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AA seq
378 aa
AA seq
DB search
MYFSEIIGQDATRQQLLHAVNHNRLSHAMIMLAPEGAGGLPTGLAFAQYLVCEDRREQDA
CGQCAACRKAAQYIHPDIHFSYPVVPRKTGDKPLSTDYAAEWREFISQQPYGNAYDWLQF
IGAENKQGNITAHECQDIIRRLNLKSFESPYKILLMWMPEYLGNEGNRLLKLIEEPPLNT
IFILVAENQEQILATILSRTQLIKIPPLSKDEVVKALVERNQAPEQRARQIATIASGNYR
EALQLLQHSDNDYHELLRTWLNCIFMQNRKGLQEWVDHMASPKVGRENQKQFLRYFINVL
EHSLRLQYMDSSQLAFSDEEVDFAEKLKKLANLGQMEQLAEALDNAFYHIERNANGKILF
HALSIRLQYIFSGKPLPV
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgtatttttcagagatcatcgggcaggatgcaacgcggcaacagctgttacatgccgtg
aaccataaccgcctcagtcatgccatgattatgctggcgccggaaggtgcgggaggactg
ccgacagggcttgcctttgcgcaatacctggtgtgtgaggaccgccgggagcaggacgcc
tgcgggcaatgcgccgcctgcaggaaagcagcgcaatatattcatccggacatccatttt
tcctatcccgtcgtcccccgtaaaaccggggataaaccccttagtacagactatgcggcc
gaatggcgggaattcatctcgcagcaaccctacggcaatgcgtacgactggctgcagttc
atcggcgcggaaaacaaacagggaaatatcaccgcccatgaatgccaggatatcatccgc
aggctcaacctgaaaagtttcgaaagcccgtacaagatattgctgatgtggatgccggaa
taccttggcaatgagggcaaccgtctattaaagctgatagaagagccgcctctcaatacc
atttttatcctggttgccgaaaaccaggagcagatactggccaccatcctctcccgcaca
caactgatcaagatccctcccctgtcgaaggacgaagtggtaaaagccctcgtggagcgc
aaccaggctccggaacagcgggcccgccagatcgccaccatcgcctccggcaattaccgg
gaagccctgcaactattgcaacattccgataatgattatcatgaattgttgcgcacctgg
ctcaattgcattttcatgcagaaccgcaaaggcctgcaggagtgggtagaccatatggcc
agcccgaaagtgggacgggagaaccagaaacagttcctccggtatttcattaacgtactg
gaacacagcctccggctgcagtatatggacagcagccagctggccttctcggacgaggag
gtggattttgcggaaaaactgaagaaactggccaatctcgggcaaatggagcagctcgcg
gaagcgctggacaatgctttttaccatatcgagcggaatgccaacggcaaaatactgttc
catgccctgtccatccgcttgcagtacattttttcgggaaagcccctgccggtctag
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