Chitinophaga sp. XS-30: FW415_05155
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Entry
FW415_05155 CDS
T06207
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
chit
Chitinophaga sp. XS-30
Brite
KEGG Orthology (KO) [BR:
chit00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
chit01002
]
FW415_05155
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
chit01011
]
FW415_05155
Peptidases and inhibitors [BR:
chit01002
]
Cysteine peptidases
Family C82
FW415_05155
Peptidoglycan biosynthesis and degradation proteins [BR:
chit01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
FW415_05155
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QEH40293
UniProt:
A0A5B9WI98
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Position
1223062..1224735
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AA seq
557 aa
AA seq
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MIKKIHLLLVLPVLLAACGQGGNSGRHGVLRDTSHYTKQEYINIPLDSNKVSDFLQKHPE
YAPFGEDIREFYLKRDFHYAWIDEEGITEQAGGLINMMRSDVENGISIDSSLDKSGLQAM
YDSIALRGADIDRNDPEVTATELTLTGQFFVYANKVWGGMTSDSARNLEWYIPRKKINVN
SVLDTIISNPEKVLSGEEPVNRQYKLLRDELQKLGTLVKSNPRWDSLKIEKKTVTFKSGD
SSTVIAGVKSRLQLLGDLKEKDSSLLFTPLLDSALRTYQSRMGHKADGIIRQQTLDALNR
PLTHYMHQLLLNMERLRWVPVEVSTDYILVNIPEFKMHVYEAGKLAWSCNVVVGTPGAST
VIFSREMKYVVFSPYWNVPPGILRNEVLPGIRRSRSYLSRHNMEVVGASGKVISPGSINW
SQYKGSGFPYIVRQKPGGANALGKVKFLFPNEYNIYLHDTPSRNLFSETRRTFSHGCIRV
QEPRRLALWLLRNDSTWTEKKVDAAMSAGKEKYVTLKETIPVFIGYFTAWVNSQGQLNFR
DDVYGHDAKLARLLFGK
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgataaagaagatacacttattactcgttttaccggttttgctcgctgcctgcggccag
ggcggaaactccggcaggcatggcgtgctgcgcgataccagccactatactaaacaggaa
tacatcaacattccgctggacagtaataaagtgtcggattttctgcaaaagcacccggaa
tatgcccctttcggggaagatatacgcgagttttacctgaaaagggattttcactatgca
tggatcgatgaagaaggcataacggaacaggcaggcggcctgatcaacatgatgcgcagc
gatgtggaaaacggcatcagcatagacagttcactggataaaagcggcctgcaggcgatg
tacgacagtattgcgctgcggggggctgatatagaccggaatgatcccgaggtaacggct
acggaactgaccctcaccggccagttcttcgtatatgcgaacaaggtatggggcggaatg
accagtgattccgcacgcaacctggagtggtacattccccgtaaaaagatcaatgtgaac
agtgtgctggataccattatctccaatcctgaaaaagtgctgtccggagaagagccggta
aatcgccagtacaagctgctgcgcgatgagttgcagaaactgggcaccctggtgaaatca
aatccccgctgggattcgttaaagatcgaaaagaagacggtgacctttaaaagcggagat
tcctccactgtgatcgcgggcgtgaagtcacgccttcagctgttgggggacctgaaagaa
aaagactcttcattattgtttacgccgctgctggactccgctttgcggacctaccagtcc
cgcatgggccacaaggcagacggcattatccgccagcaaacgctggatgcgctgaaccgc
cccctgacccattatatgcaccagttgctgctgaacatggagcggctgcgctgggtgccg
gtggaggtgtccaccgactacatcctggtgaacatccccgaattcaagatgcatgtgtat
gaagcggggaaactggcctggtcctgcaacgtagtggtgggcacaccgggcgccagcacc
gtgatcttcagccgcgaaatgaaatacgtggtgttcagcccttactggaatgtaccgccg
ggcatcctgaggaatgaagtgttgccgggcatccgccgcagcaggtcttacctttcccgg
cataatatggaagttgtgggcgccagcggtaaagtgatctccccggggtccatcaactgg
agccagtacaaagggtccggcttcccctacattgtgcggcagaaacccggcggcgccaat
gctctcggcaaagtgaagttcctctttccgaacgaatacaatatttatctgcacgatacg
ccttcgcgcaacctgttttcagagacacggcggactttcagtcacggatgtatccgggtg
caggaacccaggcgcctcgctttatggttattgcgcaacgattccacctggacggagaaa
aaggttgatgcagcgatgagtgccggaaaagaaaaatatgtcacactgaaagaaaccata
cccgtgttcatcggttattttaccgcctgggtgaacagccagggccagctgaatttccgt
gatgatgtgtacggccatgatgcaaaactggccaggctcctattcggaaagtaa
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