KEGG   Chitinophaga sp. XS-30: FW415_05220
Entry
FW415_05220       CDS       T06207                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K07713  two-component system, NtrC family, response regulator HydG
Organism
chit  Chitinophaga sp. XS-30
Pathway
chit02020  Two-component system
Brite
KEGG Orthology (KO) [BR:chit00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    FW415_05220
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:chit02022]
    FW415_05220
Two-component system [BR:chit02022]
 NtrC family
  HydH-HydG (metal tolerance)
   FW415_05220
SSDB
Motif
Pfam: Sigma54_activat AAA_lid_14 Response_reg HTH_8 Sigma54_activ_2 AAA_5 AAA AAA_2 HTH_50 Mg_chelatase bpMoxR HTH_30 HTH_28 AAA_16 HTH_1 nSTAND6 MCM P-loop_TraG nSTAND3 AAA_3 HTH_29
Other DBs
NCBI-ProteinID: QEH40305
LinkDB
Position
complement(1235463..1236809)
AA seq 448 aa
MSTQQGKILIVDDDVDVLRAARLLLKRHFTQVDFEKNPQKIPYLVTNFDYDVILLDMNFT
RDLSSGKEGFEWLDKILDINPKATVVLFTAYGDVEMAVRAIKAGAVDFVLKPWENDKLLA
TIQTAVTTHQAAQEKKSGGATLHTDNVLIGDSPGMQEVMETVSRVAATDANILILGENGT
GKDLLARHIHALSQRKDKKFVPVDLGALSETLFESELFGHVKGAFTDAREDRSGRFEEAN
SGTIFLDEIGNIALPFQAKLLTVLQNRQITRVGSNKALPLDVRLICATNRNIQQMAAQQQ
FRQDLLYRVNTIEIHLPPLRERKEDIVPLAEYFLGIYRRKYNRPVAFLHDTLITQLEQYE
WPGNIRELQHAIERAVILCQGKTLMPRDVFVKTNTAAETLDTGFNLEDMERNMISQALKK
CNGNITDAAKELGLSRAALYRRMEKYNL
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgagtactcagcaaggaaagatcctgatcgttgatgatgatgtagatgtattgcgcgcc
gcaaggctgctgctgaaaaggcatttcacgcaggtggatttcgagaagaacccgcagaag
atcccctacctggtcaccaatttcgactatgatgtcatactgctggatatgaacttcacg
cgtgacctgagcagcggaaaagaaggttttgaatggctggacaagatactggacatcaat
cccaaggccacagtggtgcttttcaccgcttatggcgatgtggaaatggccgtgcgtgcc
atcaaggccggcgcagtggactttgtgctgaaaccctgggagaacgacaagctgctggcg
actatccagacggccgtcactacgcaccaggcggcacaggagaaaaagtccggcggcgct
accctgcatactgataatgtgctgatcggcgacagcccgggcatgcaggaagtgatggaa
accgtttcccgcgtagccgctacggatgccaacatcctcatcctgggggagaacggcacg
ggaaaagacctgctggccaggcacattcacgccctgagccagcggaaggataaaaaattc
gttccggtagacctcggcgcgctgagcgaaacgctgttcgaaagcgaacttttcggccat
gtaaaaggcgccttcacggatgcccgggaagaccgcagcggtcgctttgaagaagccaac
tccggcaccattttcctcgacgagatcgggaacattgccctcccctttcaggccaagctc
ctcaccgtactacagaaccgccagatcaccagggtaggctccaacaaagcccttccgctg
gatgtgcgccttatctgcgccactaaccggaacatccagcaaatggccgcgcagcagcaa
ttccgccaggacctgctttaccgtgtcaataccatcgaaatacatcttccaccgctccgg
gaacgaaaagaagatattgtgccgctcgcagaatacttcctcggcatctaccgcagaaag
tacaaccggccggtggcctttcttcatgatacgctgatcacccagctggagcaatacgaa
tggcccggcaatatccgcgaactgcaacatgccatcgaaagagccgtgatcctctgccag
ggcaaaacattaatgcccagggacgtgtttgtaaaaacaaatacagccgccgaaacactg
gataccggcttcaacctcgaagacatggaaaggaacatgatatcccaggcgttgaaaaaa
tgcaatggcaacattacagatgccgcaaaagaactgggcctgagccgcgccgcgctgtac
cgccgcatggaaaaatataacctctga

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