Chitinophaga sp. XS-30: FW415_06075
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Entry
FW415_06075 CDS
T06207
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
chit
Chitinophaga sp. XS-30
Pathway
chit02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
chit00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FW415_06075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chit03021
]
FW415_06075
Transcription machinery [BR:
chit03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FW415_06075
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_40
HTH_10
GerE
HTH_23
HTH_28
HTH_24
HTH_20
PF0610-like_N
Motif
Other DBs
NCBI-ProteinID:
QEH43965
LinkDB
All DBs
Position
complement(1441288..1441860)
Genome browser
AA seq
190 aa
AA seq
DB search
MSGYTFSDKELISLLVAGREEAFTEIYHRYWEKLFTIAYNLTRDQVLAEEITQEVFISLW
DRKGDVRIDTLNGYLATAIKFSVFKHIRRQRRRLEIVKDNYHKWSVNDEEEKIYARFLKE
YVEGIVEQLPEKCRLVFEYSRREGLTIPEIAAKMNISPKTAEAHLTKALKTIRINLKHSA
PMLLLLISQQ
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
gtgtccggttatactttttcggataaggagttgatcagccttctcgttgcggggagggag
gaggcttttaccgagatctatcaccgttattgggaaaagttgttcaccatcgcctataat
cttacaagagaccaggtgctggcggaagagatcacgcaggaggtatttatcagtttgtgg
gacaggaaaggcgatgtacggatcgatacgctgaatggttacctggctaccgccatcaag
ttctctgtcttcaagcatatccgccggcagcgcagacggctggagatcgtgaaggacaat
taccacaaatggtccgtcaatgacgaagaggaaaaaatatatgcccgcttcctgaaagaa
tatgttgaaggcatcgtggaacagcttcccgaaaaatgccgcctcgtattcgaatacagc
cgccgggaaggattgaccattcccgagatcgctgcgaagatgaacatctctcccaaaaca
gcggaagcgcatctgacgaaagcattgaaaaccataaggatcaatctgaagcattcggcg
cccatgcttttgctgctcatcagtcaacagtaa
DBGET
integrated database retrieval system