Chitinophaga sp. XS-30: FW415_06405
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Entry
FW415_06405 CDS
T06207
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
chit
Chitinophaga sp. XS-30
Pathway
chit00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
chit00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FW415_06405 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
chit01007
]
FW415_06405 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
chit03016
]
FW415_06405 (serS)
Enzymes [BR:
chit01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
FW415_06405 (serS)
Amino acid related enzymes [BR:
chit01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
FW415_06405 (serS)
Transfer RNA biogenesis [BR:
chit03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
FW415_06405 (serS)
Prokaryotic type
FW415_06405 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Motif
Other DBs
NCBI-ProteinID:
QEH40523
UniProt:
A0A5B9WJ37
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All DBs
Position
1514131..1515408
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AA seq
425 aa
AA seq
DB search
MLQVQFIRQNKELVLERLALKHFSEPGLVEEIITLDDRRKKLTLEYDETQAKVNAASKEI
GKLMASGDKAAAEARKQDVANYKQALGPIDESLRSTEQLLQDTLVKLPNLPGPQVPAGKT
PEDNVEVCGGGSKPSLYEGAVPHWDLAKTYDLIDFELGNKITGSGFPVYKNRGARLQRAL
ISYFLDYNTANGYTEVTPPYMVNEASAYGTGQLPDKEGQMYHVTADNFYLIPTAEVPVTN
IYRDEILKEAELPVKMTAYTPCFRREAGSYGKDVRGLNRLHQFEKVELVQLVRPDQSYAV
LEEMVAHVEQLIISLGLPYRILNLCGGDMSFTSAQTYDFEVYSAAQDKWLEVSSVSNFES
YQTNRMKIRYKDENGKNQLLHSLNGSSLALPRILACLLENNQTKEGILLPEVLHRYFGSD
RISNG
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgttacaggtacaatttattcgtcaaaacaaggaattggtgctggaaaggcttgcgctc
aaacatttttcagagccgggcctcgtggaggagatcataacgctggacgaccggcggaag
aagctgacactggaatatgatgaaacccaggcgaaagtgaatgcggcatcgaaggagatc
ggaaaactgatggcatcgggagacaaggctgccgccgaagcccgcaagcaggatgtagcg
aactataaacaggcccttggcccgattgacgaatcattgcgatccaccgaacaattattg
caggacacgcttgtgaagctgcccaatctccccgggccgcaggtgcctgccggcaaaacg
ccggaagataatgtggaagtgtgcggcggtggcagcaaaccatccctgtatgaaggggcg
gtgccgcattgggacctggcaaagacctatgatctgatagatttcgaactgggcaacaag
atcaccggcagcggatttcccgtgtacaagaacaggggcgcgcggctgcaaagggccctg
atcagctatttcctggactataataccgctaacggctacacggaagtaacgccgccgtat
atggtgaatgaagcttccgcctatggcaccggacagctgccggacaaggaagggcagatg
taccacgtaacagcggataacttctacctgatccccaccgccgaagtgccggtaacgaat
atctaccgggacgagatattgaaggaagcggagctgccggtaaagatgacggcctacacc
ccctgtttcagaagggaagccggctcctatggcaaagatgtgcgcgggctcaaccgcctg
catcagtttgaaaaggtggagctggtacagcttgttcgtccagaccagtcctacgccgtg
ctggaggaaatggtggcccatgtagagcagctgatcatttcgcttggtttaccctaccgc
atcctgaacctctgtggcggcgatatgagctttacctccgcacagacctacgattttgaa
gtgtattccgctgcgcaggataaatggctggaagtaagctccgtgtccaactttgaaagt
tatcagaccaaccggatgaagatccgttataaagatgaaaacgggaagaaccagctgctg
cattccctgaatggcagctcactggcgctgcccaggatactggcctgcctgctggagaat
aaccagacaaaagaaggtattctgctgccggaagtgctgcaccggtatttcggaagcgac
cgcataagcaacggataa
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