Entry |
|
Name |
(GenBank) pseudouridine synthase
|
KO |
|
Organism |
chit Chitinophaga sp. XS-30
|
Brite |
KEGG Orthology (KO) [BR:chit00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:chit03009]
FW415_07300
Enzymes [BR:chit01000]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
FW415_07300
Ribosome biogenesis [BR:chit03009]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FW415_07300
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(1732510..1733979)
|
AA seq |
489 aa
MKKSRPAKKGFTPFKENRSKPGAASSKRSGDERAAKGEERRGKRFGSDDDRPKRSFGSNE
DKPKRSFGNSEDRPKRSFSKDEDRPKRSFGNSEDRPKRSFSKDEDRPKRSFGNSEDKPKR
SFSKDEDRPKRSFGGSEDRPKRNFSKDEDRPKRSFGNSEDKPKRSFSKDEDRPKRSFGSS
EDRPKRSFSKDEDRPKRSFGDGETSPKKRSGNDSDRPKKSERKAAVHGAKAPKGKSTRKR
IAVDSPATDAAENEMPLNKFIAHCGICSRRKAVDYIKEGKVLVNDEKIIEPAFKVTAKDV
VKLNDKRIYIQKNLVYVLLNKPKGYITTTDDPEGRRTVMELVEEAAEERLFPVGRLDRNT
SGLLLLTNDGELAQKLAHPKHNIKKIYHVELDKPLTKADFETIIAGVTLEDGVALVDALG
YVDNKDKKQIGIEIHSGKNRIVRRIFEHLQYQVEKLDRVMYAGLTKKNVNRGKWRFLTDK
EVILLKHFK |
NT seq |
1470 nt +upstreamnt +downstreamnt
atgaaaaaaagcagacccgctaaaaaagggttcacaccgttcaaagaaaaccgtagcaaa
ccaggcgcagcatcttccaaacgttcgggagatgagcgtgctgcaaaaggggaagagcgg
agaggaaaacgtttcggaagtgatgatgaccggccgaagaggagcttcggcagcaatgaa
gacaagccgaaaagaagttttggcaatagtgaagacagaccgaaaagaagtttcagcaaa
gacgaagatcggcctaaaagaagcttcggcaacagcgaagacaggccaaagaggagcttc
agcaaagacgaagaccggcccaaaaggagttttggcaatagtgaagacaaaccgaaaaga
agtttcagcaaagacgaagatcgtcctaaaagaagcttcggcggtagtgaagacaggcca
aagagaaacttcagtaaagacgaagacagacccaaaagaagctttggcaatagtgaagat
aaaccgaaaagaagcttcagcaaagacgaagatcgtcctaaaaggagcttcggcagcagc
gaagacaggccaaagagaagtttcagtaaagacgaagacagacccaaaagaagtttcggc
gacggggaaaccagtccgaaaaagcgttccggcaatgatagcgaccgcccgaagaaaagc
gagcgcaaggcagcagtacacggcgccaaagcccccaaaggtaaaagcacccgcaaacgc
attgccgtagattcccccgccacagacgccgctgaaaacgaaatgccgctgaacaagttc
atcgcgcattgcggcatctgcagccgtcgcaaagcagttgactatatcaaagaaggaaaa
gtgctcgtgaacgatgaaaagatcattgagcctgctttcaaagtgaccgccaaagatgtg
gtgaagctgaatgacaaacgcatctacatccaaaagaacctcgtgtacgtattgctcaac
aaacccaaaggatacatcaccaccaccgatgatcctgaaggccgccgcaccgtgatggaa
ctggtggaagaagccgcagaggaaagacttttcccggtagggcgcctggaccgcaataca
tccggactgctcctgctcacgaacgacggggagctggcccagaaactggcccaccccaaa
cacaacatcaagaagatctaccacgtagaactggataaaccactgaccaaagccgacttc
gagacgatcatcgccggcgttaccctggaagacggcgtagccctcgtagatgccctcggg
tatgtggacaataaagacaaaaagcagatcggcatcgagatccacagcggcaagaaccgc
atcgtccgccgcatcttcgaacacctgcaataccaggtggagaagctggaccgtgtcatg
tacgccgggctgacgaaaaagaacgtcaaccgtggtaaatggcgcttcctgacagacaag
gaagtgatcctgctcaaacattttaaataa |