Chitinophaga sp. XS-30: FW415_08415
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Entry
FW415_08415 CDS
T06207
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
chit
Chitinophaga sp. XS-30
Brite
KEGG Orthology (KO) [BR:
chit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chit02000
]
FW415_08415
Transporters [BR:
chit02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
FW415_08415
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SusD-like_3
SusD_RagB
TPR_17
TPR_9
Motif
Other DBs
NCBI-ProteinID:
QEH40895
LinkDB
All DBs
Position
2042341..2043729
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AA seq
462 aa
AA seq
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MKKAIKISLFCLTVMAGCQKQNDWLDAKRQQSDIVPTTLDDFQAILDNSIMNANYPVIGQ
LGGDNYYFPDDNIGVVSSIERNAYIWSKDIFEGSVSSDYTFSYVVVGYANIVLEGLNNVQ
VDAVNLERYSSIKGQALFFRSSMFYELASIFCKPFDNETAATDLGICIRTKSNVNQIEPR
STIQRTYEQIVNDLSLAVTLLPAAQSHKTRPSKPAAFALLARVYLLMGDYMNARRFADST
LVYSNALLDFNSSAVSLSKPYRFPDFSTGNDEIIFYAYAIGYGATIPSESLNRSYVDSVL
YDSYDNDDLRKDYFFSVATSGKPKFRGTYAGIGRNFAGLATNEIYLIRAECNARLGNPSA
AVADINTLLEKRYKTGTYIPFDTNDADIALLKILNERRRELPFSGQIRWQDLRRLNKEPR
FAKTLIRNVGGTLYQLIPNDKRYVYPFPQNEIDHAGIEQNER
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagctataaaaatcagtttattttgtttaacggttatggcaggttgccaaaaa
cagaatgattggttggatgcaaaaagacagcaatctgatatagtacccacgactttggat
gatttccaggcgatattggataactcaattatgaatgcaaactatccggtaatcgggcag
ttgggaggagataattattactttccagacgataatattggtgtagtcagttctattgaa
cgaaatgcatatatctggtcgaaagatatttttgaggggtcagtttcctccgactataca
ttttcttacgttgttgtaggatatgctaatattgtactggaaggattaaataatgtgcag
gttgatgccgtcaatttggagcggtacagtagtatcaaagggcaagccctgttctttagg
tccagtatgttttatgaattggccagtattttttgtaagccttttgataatgaaaccgca
gcaacagatttaggaatttgcattaggacaaaatccaacgtcaaccaaattgaacccaga
tccactattcagcgtacttacgaacaaattgtcaacgatttaagtttagcagttactttg
ttgcctgctgctcaatctcacaaaacaaggccgtcaaagcctgccgcttttgcattgctg
gcaagggtttatttattgatgggggattatatgaatgccaggcggtttgccgattctact
ttggtttattcaaatgcgttgctggattttaacagcagtgcagtttcgctttctaagcca
tataggtttcctgatttttcgacaggcaatgacgagattattttttatgcttatgcaatt
ggatacggtgcgacgattcccagtgagagcctgaatcgttcatacgttgacagtgtatta
tatgattcttacgataacgatgatctgagaaaagattatttctttagtgtcgcaacttca
ggtaaaccaaagtttcgaggaacgtatgcggggataggcagaaattttgcaggattggcc
acaaatgaaatatacttgataagggcggaatgcaatgcaaggcttggcaatccaagtgcc
gctgttgctgatataaatactttgttggaaaagcggtataaaacaggcacttacattccg
tttgataccaacgatgccgatatagccttgctaaaaatactaaatgaaagaagaagagag
ttgccgttttctggacagatacgatggcaggatttgagaagattgaataaagaacctcgt
tttgccaagacgcttataaggaatgtaggtggaacgctgtatcaattgatcccgaatgat
aaacgatatgtttatcccttcccccagaatgaaattgaccatgccggaattgagcagaat
gaaagatag
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