Chitinophaga sp. XS-30: FW415_08930
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Entry
FW415_08930 CDS
T06207
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
chit
Chitinophaga sp. XS-30
Brite
KEGG Orthology (KO) [BR:
chit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chit02000
]
FW415_08930
Transporters [BR:
chit02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
FW415_08930
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Ortholog
Paralog
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
SusD-like
DUF4129
Motif
Other DBs
NCBI-ProteinID:
QEH40988
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Position
2163708..2165489
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AA seq
593 aa
AA seq
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MKRSILLSLTLALAILAAAPGCNKVLNEQPRASIDPAFFRTPEGLEGGIAGIYSSLRGHW
STQIFSQLFNGGTDEMVRGGAADVQHYFTYSPLMASNTNDYSGFWNSLYIDINTANGILQ
YGADAQMDAARKAQLLAQAKFLRAFCYYFLVTTFGDVPLHLEFNTSPTSADARAPIADVY
AAIIKDLTEAAAELPDQPGTGLGKPAYKATALFLLAKTYLWRGWSAAAQASDFNNAFDIS
KELIDNKAVYGLDLWPAFIDGFLEGNEYGMETIMVVDHTKDLKFGQNSAPGSFASNLSEN
KSNFMFRPNYPTVNANYPASGGASVCVRDIQNGRPFLRIRPNMRYLLDVAFANRATDSRY
DGTFQTVWLSNSTQMAPAGTPGAVTPRGTLINKVDTAIWCADRVVSPAERAAFKGIILEP
EHLPGATVPFTGTMFPSLRKWDDSTRADLNDYSDRPYILFRFAEVYLIAAEAAFKGGATM
QDAADMLNVLRIRAARKPDQTPAEYAAAVAAQTITPAQVTLDFILDERTRELYGEAVRWW
DLARTRTLVPRLQQYNLEGGPNVKDFHMLRPIPQQQIDLVTEGPPFPQNDGYF
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcagcatattattaagtttgacgcttgccctggccatcctcgcggcagcaccg
ggatgcaacaaggtgctgaacgaacagccgcgggcatctatcgacccggcctttttcagg
accccggaggggcttgaaggtgggatcgccggcatatactcatcactgcggggccactgg
agcacccagatattttcccagctgttcaacggcggaacggatgaaatggtacgcggcggc
gctgctgatgtacagcattactttacgtattccccgctgatggccagcaatacgaatgat
tattccggcttctggaacagcctgtacattgatatcaatacagcgaacggtatattgcaa
tacggcgctgatgcccagatggacgccgcccggaaggcccagttgctcgcacaggccaag
ttcctgcgcgcattctgttactacttcctggtcaccacattcggggatgtgcctttgcat
cttgaattcaatacctctccaacctccgcggatgcaagagcgcccattgcggatgtttat
gcggcgatcatcaaggatcttaccgaagcggcggcggagctccccgatcagccgggaacc
ggcctgggaaagccggcctacaaagcaacggcgctcttcctgctggcgaaaacatatctc
tggcggggatggtccgctgccgcccaggcatccgacttcaacaacgcttttgatatctcc
aaagaactgattgataacaaagcagtatatggcctggatctgtggcctgcttttatagat
ggtttcctggaagggaatgaatacggcatggaaacgatcatggtggtggaccatacgaag
gatctgaaattcggacagaactccgcaccgggatcgttcgcttcgaatctcagtgagaac
aagtccaacttcatgttccgccccaattatcctaccgtcaatgccaattacccggcttcc
ggcggggcttctgtatgtgtgcgggatattcagaacgggcgccctttcctgcgcatccgc
cccaatatgcgctacctcctggatgttgcgttcgccaacagggcaacggacagccgctac
gatggcacattccagacggtttggctatccaacagcacacagatggcgccggccggcacg
cccggcgcggtaaccccgaggggaacgctgatcaacaaagtggatacggctatctggtgc
gcggatcgtgtggtatcaccagcagaacgagccgccttcaaagggatcatcctggaaccg
gaacatctccccggagcaacggtaccttttaccggcaccatgttcccctccctcagaaaa
tgggacgattccacaagagcggacctgaatgattattcagaccggccttacatcctgttc
cggtttgcggaggtatatctcattgcggcggaagcggcattcaaaggaggcgcaaccatg
caggatgctgccgatatgctgaatgtgctgcggatcagagcggcgcggaaacccgatcag
acgcctgccgaatatgctgctgccgttgccgcgcaaaccattacccccgcacaggttacc
ctcgatttcatcctggatgaaagaacgcgggagctgtatggtgaggccgtgcgctggtgg
gaccttgcccgcaccagaacgctggtgccgcgtttgcagcagtacaatctcgaaggtggt
cccaatgtaaaggatttccatatgctgaggcccatcccgcaacaacagatagatctggtg
acggaaggccccccattcccgcagaatgacggctatttctaa
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