Chitinophaga sp. XS-30: FW415_09130
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Entry
FW415_09130 CDS
T06207
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
chit
Chitinophaga sp. XS-30
Pathway
chit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FW415_09130 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chit03400
]
FW415_09130 (priA)
Enzymes [BR:
chit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FW415_09130 (priA)
DNA repair and recombination proteins [BR:
chit03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FW415_09130 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
Helicase_C
PriA_C
Zn_ribbon_PriA
Cas3-like_C_2
Zn_ribbon_6
nSTAND3
IstB_IS21
AAA_30
ATPase_2
FYVE
Motif
Other DBs
NCBI-ProteinID:
QEH41022
UniProt:
A0A5B9WK38
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All DBs
Position
2206189..2208633
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AA seq
814 aa
AA seq
DB search
MKFVDVILPLALPRNYTYAVPPEMEDTIRVGSRVAVPLGRQKRYAGIVKAIHEQAPSAYK
TKPVMDLLDKEPVVYPTQLAFWEWVAQYYMCNEGDVLNAALPAHLKLSSETVLLFNDAFG
DDFTLLDDHEYLVAEALHIRKELRIGEVQLILDRSDVYSVIKKLIEKQVCLVYEEMKEAY
KEKKENYILLNPAYEGDEQLAPLFDELARAPKQMELLLAYLHLLKTQGDVAQSELLKKSG
ASPAQLKGLVDKQILQIDKRTVDRIRMGRMEAQIDFILSPAQEKALTEVKACFTEKQVTL
LHGVTSSGKTELYVKLMEESLATGKQVLYLLPEIALTAQIIRRLQKHFGGQIGIYHSRFS
NNERVEIWNKVKSGEIRIVLGARSSLLLPFRDLGLIILDEEHDASFKQQDPAPRYHARDA
AIYYAALFKAKVLLGSATPSLESYFNARQGKYGLVTLQERFGGIAMPVIEIVDMKKETAL
KEVVNNFTSVLREGIRQSLEAGKQVILFQNRRGYAPFLLCTTCGWIPNCKQCDVSLTWHK
HLDKLHCHYCGTRYPYIYTCAACGSQTLMPKNFGTEKIEEDLQQLFPDARIARMDMDAIR
SKDSHNKMILLLEQKEIDILVGTQMVVKGLDFENVNLVGIISADSLLSFPDFRVNERAFQ
LMEQVSGRSGRRDGQGKVIIQASNTNHPVLRDVTAHDYTSMYEREIAEREKFGYPPFYRL
LKVTVRHKKQPTAEQAALILGNWIRPQLGAQLVGPAAPPVSRVRGFYLQEMLIKLPRDTK
KIAQIKHMLKEYFSQLQIEKQFRSVVITPDVDCI
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgttgatgtcatattgcccctggcattgcccaggaattacacgtatgccgtg
cccccggagatggaagataccatccgcgtgggaagccgtgtggccgttcccctgggccgg
cagaaaagatatgcgggtatcgtaaaggctattcacgaacaggctccttccgcatacaag
acaaagccggtgatggacctgctggacaaagagcctgtcgtatatcccacacagttagct
ttttgggaatgggtcgcacagtactacatgtgcaacgaaggtgatgtgctgaatgccgcc
cttcccgcgcatctcaagctctccagcgaaaccgtcctgctttttaatgatgccttcggc
gatgattttaccctgctggacgatcatgaatacctcgtagccgaagccctgcacatccgt
aaggagctgcgcattggcgaagtacagctgatcctcgaccgctccgatgtgtattccgtg
atcaagaaactgatcgaaaaacaggtttgtctcgtttacgaagagatgaaggaagcctat
aaagagaagaaagagaattacatcctcctgaaccctgcttacgaaggcgatgagcaactg
gccccgctgttcgacgagctggcccgtgcgcccaagcagatggagctgctgctggcctac
ctgcacctgctgaaaacacagggcgatgtagcgcaaagcgaactgctgaagaaatccggc
gcctctcccgcacagctcaagggactggtggacaaacagatattacagatcgataaacgg
acggtagaccgcatccgcatgggcagaatggaggcgcagatcgattttatcctcagcccc
gcacaggagaaggccctgacagaagtaaaggcctgctttaccgaaaaacaggtgaccctg
ctgcatggcgtcacatccagcggcaaaacggaactgtacgtgaagctgatggaagaaagc
ctggccaccggcaaacaggtgttatacctgctgccggagatcgcgttgaccgcgcagatc
atccggcgcttgcagaaacatttcggcggccagatcggtatttatcattcccgtttttcc
aataatgaacgggtggagatatggaacaaggtgaagagcggggagatacggattgtgctg
ggcgcgagatccagcctgctgctgcctttccgtgatctgggcctgatcatcctggatgag
gagcatgatgcttcgttcaagcagcaggaccccgccccccgctaccatgcccgcgatgcg
gcgatatactacgccgcgctcttcaaagcgaaagtattgctcggctccgccaccccttcg
cttgaatcttatttcaatgccaggcaaggcaaatacggtcttgttaccttgcaggaacgc
ttcggcggcattgccatgccggtgatcgagatcgtggacatgaaaaaggaaacggcgtta
aaagaagtggtgaacaacttcacttccgtgctgcgggaaggcatccggcaatccctggaa
gccggcaaacaggtgatccttttccagaatcgccgcggctatgcgcctttcctgctttgc
accacctgcggctggatacccaactgcaagcaatgcgatgtttcattgacctggcataag
catctggacaagctccattgccattactgcggcaccaggtacccatacatttatacctgc
gccgcctgcggcagccagacgctgatgccgaagaacttcggtacggaaaagatcgaggaa
gacctgcagcagcttttcccggatgcccgcatcgcgcggatggatatggatgctatccgg
agcaaggacagccacaataaaatgatcctgctcctggagcaaaaagagatagacatcctg
gtaggtacacaaatggtcgtaaagggcctggatttcgagaacgtgaacctggtaggcatt
atcagcgcggacagcctgctgagctttccggacttccgggtgaacgaacgggcctttcag
ctgatggaacaggtaagcggccgttcaggcaggagggacgggcagggcaaagtgatcatc
caggcgagcaatactaaccacccggtattgcgggatgttaccgcgcatgactacacgtcc
atgtacgaaagggagatcgcggaacgggagaaattcggctatccgccattttaccgcctg
ctgaaggtcaccgtacggcataagaaacaaccaacggccgaacaggctgcattgatattg
ggcaactggatcaggccacagctgggagctcagctggtggggcccgctgcgccgccggtg
agccgcgtaaggggattctacctgcaggaaatgttgatcaaactgccgcgggatactaaa
aagatcgcgcagatcaaacacatgctgaaagaatatttctcccagctgcagatagaaaaa
caattccgctcggtggtcatcacgccggacgtggattgtatatag
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