Chitinophaga sp. XS-30: FW415_09395
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Entry
FW415_09395 CDS
T06207
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
chit
Chitinophaga sp. XS-30
Pathway
chit03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FW415_09395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chit03019
]
FW415_09395
03016 Transfer RNA biogenesis [BR:
chit03016
]
FW415_09395
Enzymes [BR:
chit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FW415_09395
Messenger RNA biogenesis [BR:
chit03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FW415_09395
Transfer RNA biogenesis [BR:
chit03016
]
Prokaryotic type
tRNA degradation factors
FW415_09395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
RNase_II_C_S1
KH_Vigilin
KH_2
Motif
Other DBs
NCBI-ProteinID:
QEH41073
UniProt:
A0A5B9WKQ3
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All DBs
Position
2271574..2273928
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AA seq
784 aa
AA seq
DB search
MNLTPTTVKFDIGGGREVTIETGKMARQADGAVTVRLGNCILLATVVAAQKPKPGQSFFP
LTVDYQEKFASAGRIPGSFFKREGRLSDYEVLISRLVDRALRPLFPDDYRCEVQVLVTLI
SSDPEVMPDALAALAASAALAVSDVPVQEIISETRIARVNGEFVINPTRTQLTTADMDYI
VAATAKNIMMVEGESKECQEEDLVKAIELAHEAIKIQVKAQEELRTKVGSPAKREYEKSY
QNEELKAKVIAFAKEPILKVAKSALSKHDRSEAFKKIEEELVESLGELSEEDAPLVGEYF
HDLEKETVRNMILDDSIRLDGRVLDQVRPLNMEVDLLPSPHGSALFTRGETQSLTTVTLG
TPDDELLLENAATSSYSKFILHYNFPPFSTGEVKMMRGPGRREVGHGNLAMRSLKQQMPG
SDYAYTVRVVSDILESNGSSSMATVCAGSLALMDAGVPLPKHVSGIAMGLISRASDGKWA
VLSDILGDEDHLGDMDFKVTGTRDGICGVQMDIKVDGLSMDVMRAALSQARKGRLHILDA
MYACMEAARPEPKPHAPRMEKLIIDREYIGAVIGPGGKVIQEIQRETGTNINIEEVGQTG
EVSIFSAQKENLDKALAWIKGIVAVPEVGEEYDSVVKSVMPYGAFVEFLPGKQGLLHISE
VSWKRLENMDGVLSEGEKVKVKLVGTDPKTGKFKLSRRVLMPKPEGYVERPEREDRGDRG
DRGDRRGGGDRGDRRGGDRGDRRGGDRFDRDRGGDRSDRGDRGSSRPPQQTGEAPFEGPV
FDEQ
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgacacctactacggttaaatttgatataggcggaggccgcgaagtgaccatt
gaaaccggcaagatggcccgtcaggccgatggtgcggtaaccgtgcgtcttggtaactgt
atcctcctggctaccgttgtagccgcccagaaacccaagcccgggcaatctttcttcccc
ctcactgttgactaccaggagaaatttgcatccgccggccgtattcccggctcctttttc
aagcgggaaggcaggctgagcgactatgaagtactgatctcccggctggtagaccgtgcg
ctgcgccccctgttccccgatgattaccgttgtgaggtacaggtgctggtaaccctcatt
tcttccgatccggaagtaatgccggacgcactggccgcactggccgcatccgctgccctc
gcagtatccgatgtacctgttcaggagatcatctccgaaacacgcatcgcccgcgtgaac
ggcgaatttgtgatcaatcctacccgtacccagctgaccacagctgatatggactatatc
gtagccgccactgccaagaatatcatgatggtggaaggcgaaagcaaggaatgccaggaa
gaagacctggtgaaagcgatcgaactggcgcatgaagccatcaaaatacaggtaaaagct
caggaagaattgcgcacgaaagtgggcagtcccgcaaaacgcgaatacgaaaagtcttat
cagaatgaagaactgaaggccaaagtgatcgcttttgccaaagagcctatcctgaaagtg
gctaaatccgcgctcagcaaacatgaccgctccgaagccttcaaaaagatcgaagaagaa
ctggtggaatctttgggtgaactttccgaagaagatgctccgctggttggcgaatatttc
catgacctggaaaaagaaaccgtgcgtaacatgatcctggacgacagcatccgcctcgat
ggccgtgtgctggaccaggtacgcccgttgaatatggaagtggacctgctgccttcaccg
cacggatccgccctgttcacccgtggggaaacacaatccctcaccaccgttaccctgggt
accccggatgacgagctgctgcttgagaacgccgcaacctccagctacagcaaattcatc
ctccactacaatttccctcccttctctaccggcgaggtgaaaatgatgcgcggccctggc
cgtcgtgaagtgggccacggtaacctggccatgcgttccctgaaacagcagatgccgggc
agcgactatgcttacaccgtacgcgtagtgtcagacatcctggaatccaatggttcctct
tccatggccaccgtttgcgccggctcgctggcactgatggatgcaggtgttcccctgccc
aagcacgtttccggtatcgccatgggccttatttcccgcgcaagcgatggtaaatgggcc
gtactgagcgacatcctcggagatgaggaccacctcggtgatatggactttaaagtaacc
ggcacccgcgatggaatctgcggtgtgcagatggatatcaaagtagacggtctcagtatg
gacgtgatgcgcgctgcgctgtcacaagcccgcaaaggccgcctgcacatcctggacgcc
atgtacgcctgtatggaagcagcccgtccggaaccgaaaccgcatgctccgcgcatggag
aaactgatcatcgatcgtgaatacatcggcgccgtgatagggcccggcggtaaagtgatc
caggagatccagcgcgaaaccggcaccaacatcaatatcgaagaagttggtcagaccggc
gaagtgagcatcttctccgcacagaaagaaaatcttgataaagccctcgcctggatcaaa
ggcatcgtagccgttccggaagtaggtgaagaatatgattccgtggtgaaaagcgtaatg
ccttacggcgcattcgttgaattcctccccggcaaacaggggctgctgcatatctctgaa
gtttcctggaaacgtcttgagaacatggacggcgtactgagcgaaggagagaaagtgaaa
gtgaagctggtaggcaccgatcccaaaaccggaaagttcaagctcagccgcagagtgctg
atgccgaaaccggaaggttatgtggaaaggcctgagcgggaagaccgtggtgatcgtggc
gatcgcggagacagaagaggtggtggtgatcgtggtgaccgccgtggtggtgaccgtggg
gacagaagagggggagaccgctttgaccgtgaccgtggaggagaccgcagtgatcgtggc
gaccgtggcagcagccgcccgccgcaacagaccggagaagctccgttcgaaggcccggtg
ttcgatgaacaatag
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