Chitinophaga sp. XS-30: FW415_09595
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Entry
FW415_09595 CDS
T06207
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
chit
Chitinophaga sp. XS-30
Brite
KEGG Orthology (KO) [BR:
chit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chit02000
]
FW415_09595
Transporters [BR:
chit02000
]
Other transporters
Pores ion channels [TC:
1
]
FW415_09595
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CarbopepD_reg_2
CarboxypepD_reg
SdrD_B
EMC7_beta-sandw
PEGA
NOMO1-like_2nd
Big_1
SpaA
DUF2846
TTR_TEN1-4
Motif
Other DBs
NCBI-ProteinID:
QEH41113
LinkDB
All DBs
Position
2319410..2321851
Genome browser
AA seq
813 aa
AA seq
DB search
MRKLLIVLLALCAGSSYGQSVVKGTVKDQENNLVPGVSVMLGKGKNTITNGSGQFILNDL
QPGKYTIRFTFVGYEPSSRIIDLKAGETRVVDIMLTSSAEQLQSVEITGRKESGYKNTNS
FIGTKTATALKDVPQSISYVTKEMMADLQVMRIGEAVKYMSGVNQFSSYDDFTIRGFRTQ
NNSSVQLLNGLRTITGFWKQPLTNYLERVEVIKGPAAALFGNSSPGGVINRVTKKPLKDH
RQSLSFTTGSYNTFRTLADFTGPLNDSKTLLYRMNLGYENSQSFRDLQFDKNFIVAPSIS
FIPNDKTQVNFDMVYNRSMSRLDRGQAVFDNNDIYSTSISKSINAVNDYLNEDNLMITTS
LTHKFSDKVQFNIAYLKTAWEEDLLEHRSANTYAKDSAGNNIPTLVEMQVFDRNRRVFSD
NISTYFNFDVNTGAVSHKLLVGYDFAQSKTPWGGSQLTARGYRNSTNTGAGTYNAALPGQ
FMYETVNGVKRPVPNVPHVDLTAVSPYQLYDMSKYFYTKTAYDPALSASHGLYVQDQIKL
GKFQALLGLRYDAYRDWLNYEKPTEEVVKQDAIIPRLGLVYSVTKDINVYATYSKGYNPQ
TSVSMTNPDAGGPFDPINSNLIEVGAKGDFFKDRLSATVSVYRIQQENMLINAQESGKPD
LLREIDIESKGVELDIKGQITADWYIIMAYAYNDIPIKASERAPEVGRQSFGAPKHQGSF
WTKYSFSSGVLRGIGIGAGGNFVTERFMSLNVNQVLPAYQLVNAAVYYRIDKFQIQFNLN
NVMNKTHWVGGYDYLRLFPGAPRNWLTSVAYTF
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaaattattgattgtcctgctggccctctgcgccggcagctcctatggccagtcc
gttgtaaaaggtacggtaaaagaccaggagaacaacctggtgcccggtgtaagtgttatg
ctcggaaaaggaaaaaatacgatcacgaacggttccggacagtttatactgaacgatctc
cagcccggaaaatataccatcaggttcacttttgtcggctatgagccgtcctcccgtatt
atcgaccttaaagccggcgaaacgagggtggtggatattatgctgacctcttcggcagag
cagctgcaatccgtcgagatcaccggccgtaaggagtcggggtacaagaacaccaattct
ttcatcggcacaaaaacagctacggcattgaaagatgtgccgcaatccatcagctatgtg
accaaggaaatgatggccgacctccaggtcatgcgcattggcgaagcggtaaaatatatg
agtggagtgaaccagttcagctcgtatgacgattttaccatccggggtttccgcacgcag
aacaattcttcggtacaattgctgaacggcctgagaacgatcaccggtttctggaagcag
ccgctgaccaattacctagaaagggtggaagtgatcaaaggtcccgctgccgcattattt
ggcaacagctctcccggcggcgtgatcaaccgcgttaccaagaaaccgctgaaagatcac
cggcagagcctcagcttcactaccggcagctacaatactttccgcaccctggcggatttt
accgggcctttgaatgattcaaaaaccctgctgtaccgtatgaacctggggtatgagaac
tcgcagagcttccgcgatctgcaattcgacaagaacttcatcgtggcgccgtccatctct
tttatcccgaacgataaaactcaggtgaacttcgacatggtgtacaacagaagcatgagc
cgcctcgaccgcgggcaggcggtattcgataacaatgatatctattccacgtccatttcc
aagagcatcaatgcggtgaatgattatctgaacgaagataacctgatgatcaccacttcg
ctgacacacaagttctcggacaaggtgcagttcaatatcgcttacctgaaaacggcctgg
gaagaggatctgctggagcaccgctccgccaacacctacgcgaaagacagcgccggcaat
aacattcccacgctggtggaaatgcaggtgttcgacaggaaccgccgggtgttctccgat
aatatttccacttatttcaattttgatgtgaataccggcgcggtaagccacaagctgctg
gtgggctacgactttgcacagtccaaaaccccttggggcggttcccagctcacagccagg
gggtaccgcaacagtacgaataccggcgccggtacatataatgctgccctgcccggccag
ttcatgtatgaaaccgtgaacggtgtaaaacgtccggtgcctaacgtgccgcatgtggac
ctgacggctgtcagcccttaccagctgtacgacatgagcaagtatttttataccaagacc
gcttatgatccggcgctgtccgcttcccatgggctctacgtgcaggaccagatcaaactg
ggcaaattccaggccctgctcggcctccggtatgatgcttaccgcgactggctgaattac
gaaaagccgacggaagaggtggtcaagcaggatgccatcattcccaggctaggcctcgta
tattccgtgacgaaggatatcaatgtgtatgctacctattcaaaaggatataatccccag
acttccgtgagcatgacaaaccccgatgccggcgggccttttgatcccatcaacagcaac
ctgatagaagtaggcgccaagggagatttcttcaaggacaggttatccgccacggtatct
gtgtaccgcattcagcaggagaatatgctgatcaatgcgcaggaaagcggaaagcctgac
ctgttgcgcgagatcgacatcgaatcaaaaggtgtggaactggatatcaaagggcagatc
acggccgactggtacattatcatggcctatgcctataatgatattcccatcaaagccagc
gagagggccccggaagtgggcaggcagtcattcggcgcaccgaagcaccagggttctttc
tggacgaagtattccttcagcagcggagtattgcggggcatcggcatcggtgcgggcggc
aacttcgttaccgaacgcttcatgagcctgaacgtgaaccaggtattgccggcttaccag
ctggtcaacgccgccgtgtactaccggatcgacaagttccagatacagttcaacctgaac
aatgtaatgaacaaaacgcactgggtgggcggatatgattatcttcgcctgttcccggga
gcgccgcggaactggctgacatccgtagcgtacacgttttga
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