KEGG   Chitinophaga sp. XS-30: FW415_12670
Entry
FW415_12670       CDS       T06207                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
chit  Chitinophaga sp. XS-30
Pathway
chit00010  Glycolysis / Gluconeogenesis
chit00020  Citrate cycle (TCA cycle)
chit00260  Glycine, serine and threonine metabolism
chit00280  Valine, leucine and isoleucine degradation
chit00310  Lysine degradation
chit00380  Tryptophan metabolism
chit00620  Pyruvate metabolism
chit00630  Glyoxylate and dicarboxylate metabolism
chit00640  Propanoate metabolism
chit00670  One carbon pool by folate
chit00785  Lipoic acid metabolism
chit01100  Metabolic pathways
chit01110  Biosynthesis of secondary metabolites
chit01120  Microbial metabolism in diverse environments
chit01200  Carbon metabolism
chit01210  2-Oxocarboxylic acid metabolism
chit01240  Biosynthesis of cofactors
Module
chit_M00009  Citrate cycle (TCA cycle, Krebs cycle)
chit_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
chit_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
chit_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:chit00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    FW415_12670 (lpdA)
   00020 Citrate cycle (TCA cycle)
    FW415_12670 (lpdA)
   00620 Pyruvate metabolism
    FW415_12670 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    FW415_12670 (lpdA)
   00640 Propanoate metabolism
    FW415_12670 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    FW415_12670 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    FW415_12670 (lpdA)
   00310 Lysine degradation
    FW415_12670 (lpdA)
   00380 Tryptophan metabolism
    FW415_12670 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    FW415_12670 (lpdA)
   00670 One carbon pool by folate
    FW415_12670 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:chit04147]
    FW415_12670 (lpdA)
Enzymes [BR:chit01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     FW415_12670 (lpdA)
Exosome [BR:chit04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   FW415_12670 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 GIDA FAD_binding_2 FAD_oxidored NAD_binding_8 DAO Lys_Orn_oxgnase HI0933_like FAD_binding_3 Thi4 3HCDH_N AlaDh_PNT_C 2-Hacid_dh_C DUF2666
Other DBs
NCBI-ProteinID: QEH41690
UniProt: A0A5B9WPP7
LinkDB
Position
3083661..3085067
AA seq 468 aa
MAYDVIVIGSGPGGYVAAIRASQLGFKTAVVERESLGGICLNWGCIPTKALLKSAQVMEY
IQHSKDYGVTVGDAKADFPAVIKRSRGAADKMSKGVQFLMKKNKIDVIMGNAKLKAKGQV
EVTDKDGKTAVHEAKHIILATGARARELPNLKFDGKTVIGYREAMNLPTQPKSMIVVGSG
AIGVEFAYFYASMGTKVTIVEFMPRIVPVEDEDISKELEKIYKKKGIEVMTNASVEAVEA
TKSGVKAKVKTATGEISLEADVVLSAVGITANIENIGLETLGVKTDKGKVLVDQYYQTNV
SGVYAIGDIVPGQALAHVASKEAIICVEAFAYNEKKYNHKPTPINYNNVPGCTYCSPEIA
SVGYTEKQAKDAGYEIKVGKFPFSASGKAVGAGATEGFVKVIFDAKYGEWLGTHMIGMNV
TEAIVQTVTARTLETTYQEVLNSIHPHPTMSEAVKDAIEVAYGEAIHL
NT seq 1407 nt   +upstreamnt  +downstreamnt
atggcatacgacgtaatcgtaattggtagtggccccggtggatacgtggcggctatccgg
gcttctcaactgggatttaaaacagctgtggtggaaagagagagtttgggcggcatctgt
ttgaactgggggtgtatcccgaccaaggcattgttgaaatcagcgcaggtaatggaatat
atacaacattccaaagattacggcgtaaccgtaggcgatgccaaagcggattttcccgct
gtgatcaagcgtagccgcggtgctgcagataaaatgagcaaaggcgttcagttcctcatg
aagaagaacaagatcgatgtgatcatggggaatgcaaagctcaaagcaaaaggacaggta
gaagtgaccgataaagacggcaaaactgccgtacatgaggcaaaacatatcattctcgcc
accggcgcccgcgcccgtgagctgccgaacctgaagttcgatggcaaaactgtgatcggc
taccgcgaagcaatgaacctgcccacgcagcctaaaagcatgatcgtggtaggttccgga
gccatcggcgttgaatttgcgtatttctacgccagcatgggcacaaaagtgaccatcgtt
gagttcatgccgcgcatcgttccggtggaagatgaagatatctcgaaagaactggaaaag
atctacaagaagaaaggcatcgaagtaatgaccaacgccagcgtggaagccgtagaagca
accaagtccggcgtaaaggccaaagtgaagaccgccaccggtgaaatttccctggaagcg
gatgtggtactgagcgccgtaggcatcaccgccaacatcgaaaacatcggcctggaaacc
ctcggcgtgaaaaccgacaaaggcaaggtgctggtggaccagtattaccagaccaatgta
tccggcgtttatgcgatcggagacatcgttcccggtcaggccctcgcacacgtagcctcc
aaggaagccatcatttgcgtggaagccttcgcttacaacgagaaaaaatacaaccacaaa
cccacacccattaactataacaacgtaccgggctgtacctactgctcacccgagatcgct
tctgttggttataccgagaagcaggccaaggacgccggttacgaaattaaagtgggcaaa
ttccccttctccgcttccggcaaggcagttggcgcaggggctacagaaggcttcgtaaaa
gtgatcttcgatgccaaatacggcgaatggctgggtacgcacatgatcggcatgaacgtg
accgaagccattgtgcagaccgtaaccgcccgtacgctggaaactacttaccaggaagtg
ctcaacagcatccatccgcacccgaccatgagtgaagctgtgaaagatgcgatcgaagtg
gcttatggcgaggcgatacacctgtaa

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