Entry |
|
Name |
(GenBank) uracil-DNA glycosylase
|
KO |
|
Organism |
chit Chitinophaga sp. XS-30
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:chit00001]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FW415_13215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:chit03400]
FW415_13215
Enzymes [BR:chit01000]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FW415_13215
DNA repair and recombination proteins [BR:chit03400]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FW415_13215
Prokaryotic type
FW415_13215
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
3214135..3214806
|
AA seq |
223 aa
MDVKIESSWKEVLKDEFQKTYFEQIVMFLKHEKALNKVIYPPGNLIFNAFDKTPFDNVKV
VILGQDPYHGPGQAHGLCFSVQKGVKPPPSLVNIYKELNKDVGIPIPETGDLTKWAEHGV
LLLNAMLTVRNGEPASHSKIGWETFTDAVIRKISDLKEGVVFMLWGKFAQDKQVLIDATR
HYILKAAHPSPFSADKGFFGCRHFSKANELLVKDGKEPVDWQL |
NT seq |
672 nt +upstreamnt +downstreamnt
atggatgtaaagatcgaaagcagttggaaagaggtattgaaagacgaattccagaaaacc
tatttcgagcagatcgtcatgttcctgaaacatgagaaagcgctcaataaagtcatctac
cccccgggaaacctgatcttcaatgcgtttgacaaaacccccttcgataatgtaaaagta
gtcatcctggggcaggacccctatcacgggcccggccaggcacacggcctctgcttctct
gtgcagaaaggtgtaaagcccccgccatccctcgtcaatatctataaagagctcaataag
gatgttggcatacccatcccggaaacaggggatctgaccaaatgggcagaacatggggta
ttgctgctcaatgccatgcttactgtccgcaacggggagccggcatctcatagcaagatc
ggctgggaaacttttacagacgccgtcatccgaaagatatccgatctgaaggaaggagtg
gtgttcatgctctggggcaaatttgcgcaggacaagcaggtgcttatcgatgctacccgg
cattacatcctcaaggcagcgcatccgtcccctttcagtgcggacaaaggttttttcggc
tgcaggcatttttccaaagccaatgagctgttggtaaaagatggaaaggaaccggtagac
tggcaactgtaa |