Chitinophaga sp. XS-30: FW415_14175
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Entry
FW415_14175 CDS
T06207
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
chit
Chitinophaga sp. XS-30
Pathway
chit02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
chit00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FW415_14175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chit03021
]
FW415_14175
Transcription machinery [BR:
chit03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FW415_14175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
Sigma70_ECF
HTH_24
HTH_AsnC-type
HTH_23
HTH_38
HTH_11
Motif
Other DBs
NCBI-ProteinID:
QEH41956
UniProt:
A0A5B9WN29
LinkDB
All DBs
Position
3460823..3461389
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AA seq
188 aa
AA seq
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MQNLSDKELYALLRAGNHAAFQAIYERHASAMVQFAFSRTGSVDDAKDCVQDVFTWLWQS
GRAIQVPDSASGLEAYLKSAVRNKIINLMEKRLRQRHYSREAVLDLAADMPPDVHLSHQE
LNNLVQKEINAMPEKMRRIFELSRDAGLSNKQIAGKLSLSEQTVKNQLGNARQRLRGKLE
HYLSIWLL
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatttatcagataaggaattgtatgcattactgcgggctggcaatcatgccgcg
tttcaggcgatctatgaaagacatgcttcggcaatggtgcagtttgcgttttcgagaaca
gggagtgtagatgatgccaaagattgtgtgcaggacgtatttacctggctttggcagtcg
ggccgtgccattcaggtcccggacagcgcatccgggctggaggcgtacctgaaatctgcg
gtcaggaacaagatcattaatctgatggagaaaaggctgcggcagcggcattattccagg
gaggcggtgcttgacctggcagcggatatgcctcctgatgttcatctcagccatcaggag
ctgaataacctggtgcaaaaagagatcaatgcaatgcctgagaaaatgcgcaggatattt
gagttgagccgggacgcgggtttatccaacaaacagatcgccggtaaactttccctctcc
gaacaaaccgtgaagaaccagctgggcaatgcccggcaacgcctgcgcggcaagctggaa
cactacctctccatctggctgctctaa
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integrated database retrieval system
