Chitinophaga sp. XS-30: FW415_15015
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Entry
FW415_15015 CDS
T06207
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
chit
Chitinophaga sp. XS-30
Brite
KEGG Orthology (KO) [BR:
chit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chit02000
]
FW415_15015
Transporters [BR:
chit02000
]
Other transporters
Pores ion channels [TC:
1
]
FW415_15015
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
CarbopepD_reg_2
Plug
CarboxypepD_reg
CooC_C
Big_1
MetallophosN
Motif
Other DBs
NCBI-ProteinID:
QEH44069
UniProt:
A0A5B9WU73
LinkDB
All DBs
Position
3665659..3668610
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AA seq
983 aa
AA seq
DB search
MPVMDLLTQMLTGTGLIFDRLENNLVVIKKDENSLAQITVKGKVTDSRGIPLPGVSVVSG
PRTGTVTNETGEYTIRIDERGTLTFSYIGYAAQAIPVNNQTTINVILLESKDTELNEVVV
VGYGTMNKRDLTGAVTNLGQRDLIAGSVSPLLAIQGKVPGLTVLSTNGTDPNAGLSLQLR
GVNSINAGMGPLVVIDGIPGGNINTVVKEDIESISVLRDASAAAIYGTRASGGVILITTK
KAKAGTVRATFTSELFMESIRKRPESLTPEEFVANDMGTDLGHKTDWYDEVTNQSPFSQR
YVLNLNGGTENAQIYASFMARDAVGMAIESRRKETGGRVNTYFRFFDGVAELTTNISYIQ
ANADFSDNGIFNMALTMNPTETPYDASDVTGYNILLGGYDYFNPLAEVKLRKDQGQFKYL
LASSTLKINITKDLYASGMIALKNDTEHRNFYRSAQHRISRNDNIDGNASQSYSRWNDRT
LELTLNYNKSIGHHSINAVGGYTYQDFNGQGFSANNSDFPVDGIADNDMGTGTWLADGRA
GIGSWKSATVKLIAFFGRVNYTFKDRYILTASLRHEGSSKFAKGNQWGNFPGISAAWRVS
EESFLKGSSIVNNLKIRGGYGATGNEGFNANVATRVYGPDTWWLVDGEWLRTYGVLHNQN
PDIRWEVKKEFNIGLDFALFDNRLHGRVDFYKRRVDDMIYDVSVSQPPAIHDKTSINVGN
MENKGYEFELNWNAVKNTDWSYTTGIVASANRSTLTTLDGGQTFSDRKSFPAPGNPGSAV
RLYPGEDIGRFFIWRFAGFTDEGEWMLYDRSGKAFDVTAQAKKIEDKVFIGNAIPKLILS
WNHSVTWKNFDAGVYMRSWIGHDVYNMINMYYSLPNVRGQNVLREAFGKHKDIHGEKELS
DYWLEKGSFLKMDALNFGYTFRPQAVKPLKGLRLYVTARDLFVLTNYSGLDPEVNINGLE
PGFEERNVYPKTRTFMFGLQANF
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtgatggacttgctgacgcagatgttgacgggtaccggtctcatttttgaccgg
ttggaaaataacctcgtggtgatcaaaaaagatgaaaactcgctggcgcagatcaccgtg
aagggaaaagtgacggatagcagggggataccgcttcccggcgtcagcgttgtgtccggc
ccccgcaccggtaccgtaacgaatgaaacgggagaatacaccatccggatagacgaaaga
ggcacacttactttcagttatatcggttatgctgcgcaggccatccctgtgaacaatcag
accaccatcaacgtcatcttactggaaagcaaggataccgagttgaatgaagtggtagta
gtggggtatggtaccatgaacaaaagggacctcaccggcgctgttaccaatctggggcag
cgtgacctcattgccggatctgtatcgccgctgctggctatccagggaaaggtacccggt
ctcaccgtattatccacgaatggaacagatcccaacgccgggttatccctgcaacttcgc
ggggtgaactccattaatgcgggcatgggccctctcgtggtaatagatggtatccccggt
ggcaacatcaataccgtcgtgaaagaagatattgaatccatcagcgtgctgcgcgatgct
tccgctgccgctatttacggcacccgggcttccggtggcgtgatcctcatcaccaccaaa
aaagcaaaggccggcaccgtgcgggcgaccttcaccagcgaattatttatggaatccatc
cgtaaaagaccagaatccctcaccccggaagaatttgttgccaacgatatgggaacggac
ctggggcataaaacggactggtacgacgaagtgaccaatcaatcccccttcagccagcgc
tatgtgctgaacctgaatggcggcacggagaatgcacagatctatgcgtctttcatggcc
cgcgatgcggtgggtatggccatcgaatccagaagaaaagaaactggcgggcgtgtgaat
acctatttccgcttttttgacggggtggcagagctgaccacgaatatcagctacatacag
gcaaatgctgatttcagcgataacgggatatttaatatggcgctgacaatgaacccaacg
gaaacaccttacgatgcgtccgatgtaaccggctacaacatactgttgggggggtatgat
tatttcaatccgctggcggaagtaaagctgcggaaagaccaggggcaattcaaatacctg
ctggcaagctctacgctgaagatcaatattacaaaggacttgtatgcttccggtatgatt
gcgctcaagaatgataccgagcacaggaatttctatcgctctgcgcagcaccgcatttcc
cgtaacgataatattgacggtaatgccagccagtcttacagccgctggaatgaccgcaca
ttggagctgaccctgaactataataagtccatcggccatcacagcataaatgccgtaggc
ggatatacttaccaggatttcaatggccagggcttcagcgccaataactcggactttccg
gtagacggcattgcagacaatgatatgggcaccggcacctggctggctgacggccgcgcg
ggtattggttcctggaagagtgccaccgtgaagctgatcgcttttttcggcagggtgaac
tatactttcaaagaccgttatatactcactgcatcattgcggcatgaaggatcttcgaag
tttgccaaaggcaaccaatggggtaatttccccggtatatctgcagcatggcgtgtttca
gaagaaagcttcctgaaaggctcatccatcgtaaataacctgaagatccgtgggggatac
ggcgctaccggtaatgaaggattcaatgccaatgttgctacccgcgtgtacggtcctgat
acctggtggcttgttgacggtgaatggctgcgcacctacggtgtgttgcataaccagaat
cccgacatccgctgggaagtaaaaaaggaatttaatatcgggcttgattttgcattgttt
gataatcgccttcatggccgtgtagacttctacaaacgtagggtggatgatatgatctat
gatgtgagtgtttcccagccgcctgctattcacgataaaaccagcatcaatgtgggcaat
atggaaaacaaagggtatgagtttgagctgaactggaacgcggtaaaaaacacggactgg
agctatactacaggcatcgtggcatctgccaaccgcagtacgcttactacactggatggc
gggcagacgttttcagaccgtaaatcctttcccgctccgggtaaccccggcagtgccgtg
cgcctctatcccggggaagatatcggccgcttttttatctggcgttttgccggttttacg
gatgaaggggagtggatgctgtacgatcggtcaggaaaagcttttgatgtgaccgcacag
gccaagaagatcgaagacaaagtgttcatcggtaatgccattccaaaactgatcctgtca
tggaatcattccgtgacctggaaaaattttgatgcgggtgtttacatgcgcagctggatc
gggcatgatgtgtacaacatgatcaacatgtattacagccttccgaatgtacgcgggcaa
aacgtgctgcgcgaagcattcggcaaacacaaagatattcatggggaaaaagagttgagc
gactactggctggagaaaggctctttcctgaaaatggatgcgctcaacttcggctatact
ttccggccgcaagccgtgaaaccgctgaaaggactgcgcctgtacgttaccgcgcgcgat
ctgttcgtgctgaccaattacagcgggcttgatcctgaagtaaacatcaacgggcttgaa
cccggttttgaagagcggaacgtgtacccgaaaacacgtacgttcatgtttggcctgcag
gcaaatttctga
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