Chitinophaga sp. XS-30: FW415_15400
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Entry
FW415_15400 CDS
T06207
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
chit
Chitinophaga sp. XS-30
Brite
KEGG Orthology (KO) [BR:
chit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chit02000
]
FW415_15400
Transporters [BR:
chit02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
FW415_15400
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
Motif
Other DBs
NCBI-ProteinID:
QEH42182
LinkDB
All DBs
Position
3771886..3773400
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AA seq
504 aa
AA seq
DB search
MKQLFIYTILLGCLLQTSCEKLLDIDSSHAVSEKNFWNSHEDTRTALISVYGLMRAALAD
NNAFWMYGELRQGDFTAIQRQDLKAIIRGDLRAQYPLLQSLSNWRRFYAVINAANMFLEH
VGEVKARDPKYTDQNMRVDIAQMRFMRAYTYFCLVTVWGDVPLITASHDGVFTNKPREKQ
ETVLAFIEKEMLQSAEDLPYRYSADDPQQLGNYYNESNARWMGTLARKLTAYAMLAHVAA
WQGKYVDASVYGRFVLDNYGKAGSFYLSTEDLTRRGGYFHWKQHNHILGFNFDWGHVDAS
FSGHLEELSLARPVINKALPDIYIPKDTILSVFDQPLDERFSLDTLTGAPTSQRYFTSFS
SQVPIFSKVKEIQDGGTTDPSFRIYSSSILVTRLENITLLQAEALAVIGQRQGAIDLLNT
IRDLRRIKKYDAATEGDLIDAIFRERRKELMGEGWRWFDLIRLQKIKQDDPAFLELIRNG
GIYWPVANEVLTQNPLIKQNPYWQ
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaactattcatatatacgatcctgttaggctgtctgctccagacaagctgcgaa
aaattgctggatattgattccagtcatgccgtatccgaaaagaatttctggaactcgcat
gaagatacccgtacggcgctgatcagcgtgtacggcctgatgcgggctgccctggcagat
aacaatgctttctggatgtacggggaactgcggcagggcgactttaccgccattcagcgg
caggacctgaaggccatcatccgcggggatctcagggcacaataccccctgctgcaatca
ctctccaactggcgccgtttttatgcggtgatcaatgccgcgaatatgttcctcgaacat
gttggcgaggtgaaagcgcgtgatcccaaatataccgatcagaatatgcgggtggacatc
gcgcagatgcggttcatgcgcgcttatacctatttctgcctggtgacggtttggggagat
gttcccctgatcaccgcttcgcatgacggggtattcacgaacaaaccgcgggaaaagcag
gaaacggtactggcattcatcgaaaaagaaatgctccagtccgccgaagacctaccttac
cgctacagtgcagatgatcctcagcagctgggcaactactacaatgaaagcaatgcccgc
tggatgggaacactggcccgcaaactcacggcatatgccatgctggcccacgtagcggcc
tggcagggcaaatatgtggatgcctccgtgtacgggcgttttgtgctggacaattacggc
aaggccggcagcttttatctcagcacggaggacctgacgcgcagaggcggatattttcac
tggaaacagcataatcacatcctcgggttcaatttcgactggggacatgtggatgcctct
ttctccgggcacctcgaagaactgagccttgcccgccccgtgatcaacaaagcgttaccg
gacatttacatccccaaggacaccatcctctccgtatttgaccagccgctggacgagcgt
ttcagtctggataccctcaccggcgcgcccacatcccagcggtatttcaccagcttttcc
agccaggtgcccattttcagcaaggtcaaggagatacaggacggcggcaccactgatcca
tccttccgcatctattccagttccatcctcgttacccgtctggagaatatcacgctcctg
caggcagaagcgctggcggtgatcggccagcggcagggggctattgacctcctgaacacg
atccgggacctccgcaggatcaaaaagtatgatgcggccacagagggcgacctgatcgac
gctattttccgtgaacgccgcaaagagctgatgggagagggctggcgctggttcgacctg
atcaggctgcagaagatcaagcaggacgaccctgcattcctggagctgatccgcaatggc
ggcatctactggccggttgccaatgaagtgctgacgcagaatcctctcatcaaacagaat
ccctactggcaatga
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