KEGG   Chitinophaga sp. XS-30: FW415_16030
Entry
FW415_16030       CDS       T06207                                 
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
chit  Chitinophaga sp. XS-30
Pathway
chit02020  Two-component system
Brite
KEGG Orthology (KO) [BR:chit00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    FW415_16030
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:chit03021]
    FW415_16030
Transcription machinery [BR:chit03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     FW415_16030
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_ECF Sigma70_r4 HTH_10 GerE NUMOD1 HTH_30 HTH_40
Other DBs
NCBI-ProteinID: QEH42297
LinkDB
Position
3937287..3937829
AA seq 180 aa
MHLLEDTALLDMIREDDRKAFTTIYDRYWDRLYASAFYHLKSTAAAEEIVQDVFVTLWQK
RHELQIGELSKYLSAMVRYAVYRYMARENQRRELHLSAGTPVIAPASTLEHKLMLEIVDR
LSCELPEKCRIVFRATKLYDQSIREVAQNLNISHKTAEAHLTKALRIIRMNLGKAFHFFF
NT seq 543 nt   +upstreamnt  +downstreamnt
atgcatcttttggaggacactgcattattggacatgatcagggaggatgaccggaaagcg
ttcacaacaatttatgaccgctactgggatcgcttatacgcctccgcattttaccatctg
aaaagtaccgccgccgctgaagaaattgtacaggatgtctttgtcacgctctggcagaaa
aggcacgagctgcagatcggggaactgtccaaatatctttccgccatggtgcgttatgcc
gtttaccgttacatggccagggaaaatcagcgcagggagctgcatctttcagccggaacg
cctgttattgcacctgccagcacccttgagcacaagctcatgctggagatcgtggacagg
ctcagttgcgaattgcccgaaaaatgccgtatcgtattccgggccaccaaattatatgac
cagtccatcagagaggttgcccaaaatctcaatatctcccataaaacagcggaagcccat
ctcacaaaggctttacgcattatccgaatgaacctcggcaaagcctttcacttctttttc
tag

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