Chitinophaga sp. XS-30: FW415_16350
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Entry
FW415_16350 CDS
T06207
Symbol
recF
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
chit
Chitinophaga sp. XS-30
Pathway
chit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FW415_16350 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chit03400
]
FW415_16350 (recF)
DNA repair and recombination proteins [BR:
chit03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FW415_16350 (recF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
AAA_29
AAA_27
SbcC_Walker_B
ABC_tran
ATPase_2
AAA_16
DUF2326
DO-GTPase2
nSTAND3
T2SSE
NACHT
AAA_14
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
QEH42356
LinkDB
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Position
4015251..4016327
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AA seq
358 aa
AA seq
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MLSVSKISLTQFKNYSHRVFHFSKRIVGITGRNGSGKTNLLDAIYYLCFSKSYFSTAEHQ
NVQYETNGFRLEALLQRHAKGEKVVCTMKEGKKEIALNDEAYERFSRHIGQFPAVMIAPD
DAEIILGGSEGRRKWLDSLLSQLQPGYLDHLIAYHKVLQQRNSLLKTMQPTDALLDVFDE
QLVQHGIPVYEARKAFLETFIGQVQDRYDYLAGKHETVAFRYQSQLQEQGLASLLAGSRL
RDKQMQRTTQGIHRDDLLFLLDEHLMKNSASQGQRKSFLFALKLAQYEAIRAHKQFPPIL
LLDDVFEKLDQERVSRLISLVLRPDYGQVFITDTHGDRLLQAFSDNPDAIQLISMQDL
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
ttgttatcagtttcaaaaatatcgctcacccaattcaagaattactcccaccgtgttttc
catttttccaaaaggatcgtaggcattacaggccggaacggctcggggaaaacgaatctg
ctggacgctatttattatctctgcttttccaagagttatttcagcacggccgagcatcag
aatgtgcagtacgaaacgaacggcttccggttggaagccctgctgcaaaggcatgcgaag
ggcgaaaaggtcgtttgcaccatgaaagaagggaaaaaggagatcgcattgaatgatgag
gcctatgaacggttttcccggcatatcgggcagttcccggccgttatgatcgcgcctgac
gatgccgagatcatcctcggcggcagtgaagggcggcggaaatggctggacagcctcctc
tcccagttgcagccggggtacctggatcacctcattgcctatcacaaagtgctgcagcaa
cggaacagcctgctgaaaaccatgcagcccaccgatgccctgctcgatgtgttcgatgag
cagctggtgcagcatggcattcctgtgtacgaagcgcgcaaggccttcctggagaccttc
atcgggcaggtacaggaccggtacgattacctcgccggaaagcatgagaccgttgctttt
cgctatcagagccaattgcaggaacagggcctcgcttccctcctggccggtagccgcctg
cgggacaagcaaatgcaacgcaccacgcagggtattcaccgggatgatctcctttttctg
ctggatgagcatctcatgaagaacagcgcctcccaggggcagcgcaaaagcttcctgttc
gccctgaaactggcgcaatatgaagccatccgcgcgcacaaacaattcccacccatcctt
ttactggacgatgtgttcgaaaagctggaccaggaacgggtatcccgcctgatcagcctg
gtgctgagaccggactacggccaggtattcattacggatacccatggcgaccggctgttg
caggcgttctcggacaacccggacgcgatccagctgatctccatgcaggacctttga
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