Chitinophaga sp. XS-30: FW415_16610
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Entry
FW415_16610 CDS
T06207
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
chit
Chitinophaga sp. XS-30
Pathway
chit03030
DNA replication
chit03430
Mismatch repair
chit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FW415_16610
03430 Mismatch repair
FW415_16610
03440 Homologous recombination
FW415_16610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chit03032
]
FW415_16610
03400 DNA repair and recombination proteins [BR:
chit03400
]
FW415_16610
Enzymes [BR:
chit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FW415_16610
DNA replication proteins [BR:
chit03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FW415_16610
DNA repair and recombination proteins [BR:
chit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FW415_16610
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
GIY-YIG_UvrC
UvrC_M
GIY-YIG
DUF7508
DEDDh_C
GIY_YIG_2
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QEH42403
LinkDB
All DBs
Position
complement(4082844..4084211)
Genome browser
AA seq
455 aa
AA seq
DB search
MYAIVDIETTGGYASAGSITEIAIYIHDGHQIVQQFETLVNPHQPIPRYIQALTGITDDM
VEQAPPFEDVAEEVFNLLKDNIFIAHNVNFDYSFLRHQLDACGYRLQSKKLCTVRLSRKI
FPGFPSYSLGNICRSLHINLVNRHRAAGDALATVQLFERLLSADNNGTIAAALTTRSKER
WLPLHLPQEQVADLPSTPGVYYFHDQKGKVVYVGKAKNIRKRVTSHFTGNNANRQRQEFV
RNIHSISFEKTGTELMAFILESIEIRRLWPIYNNAQKRIESRYGFYVFEDQQGYMRLAIE
KRRKYTTPVFAFNMLTEGHQRLRTLVRDFKLCPKLCFLQTSQDTCTGVEEKTCKGACEKK
ETPKKYNLRVQKAVAHLLAEQPSFMIVDSGREATEQSCILMEKGRFYGMGYVPRDVPVSE
AETLKDWLTQYPENEFILNLLRQYAGTNSSRLISL
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcgatcgtagatattgaaacaacaggggggtatgccagcgccggcagcattacc
gaaatcgccatctatattcatgatggccaccagatcgtacagcaattcgaaacgctggtg
aatccccatcaacccatcccgcgttacatccaggcgctgacgggcataacggacgacatg
gtggagcaagctcctccctttgaagatgttgcggaagaagtgttcaacctgctgaaagac
aatattttcatcgcgcataacgtcaatttcgattattctttcctgcgtcatcagctggat
gcctgcggttaccgcctgcaaagcaagaagctctgcaccgtgcgcctcagccgcaagatc
ttcccgggattcccgtcctacagccttggcaatatctgccgttccctgcacatcaacctg
gtgaaccgtcaccgcgccgccggtgatgcactggctaccgtacagctgtttgaaagactg
ttgtcggccgacaacaacgggaccattgcggctgcactaacaacacggtcaaaggaaaga
tggctaccgctgcatctcccgcaggaacaggtggccgatctgccatccaccccgggggtg
tactattttcatgatcagaaagggaaagtggtgtacgttggcaaggctaagaatatcaga
aaacgggtgaccagccactttaccggcaacaacgccaaccgccagcggcaggaattcgtg
cggaacatacacagcatctccttcgagaaaaccggtacggaactgatggcgttcatcctc
gaatccatcgagatacggcggttatggccgatctacaacaatgcgcagaaacggatcgaa
tccagatacggtttttatgtgtttgaggaccagcagggatatatgcggctggccattgaa
aaacgccgcaaatacaccactccggtgtttgccttcaatatgctgacggaagggcatcag
cggctgcgtacactggtgcgggatttcaagttatgccccaagctgtgttttttgcaaacc
agccaggatacctgcaccggcgttgaagaaaaaacatgcaaaggcgcctgcgagaaaaag
gaaacgccgaaaaaatacaatctccgcgtacaaaaggccgtggcgcatctgttagcggag
caaccctcattcatgatcgtggacagcgggcgggaagccaccgaacaaagctgtatcctg
atggagaaagggcggttctatggcatgggatatgtaccgcgcgatgtgccggtatccgaa
gcggaaacgctcaaagactggctgacgcaatacccggaaaatgagttcatcctcaacctg
ctccgccagtatgccggcacaaattcatcaaggctgatcagcctgtag
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