Chitinophaga sp. XS-30: FW415_17020
Help
Entry
FW415_17020 CDS
T06207
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
chit
Chitinophaga sp. XS-30
Pathway
chit02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
chit00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FW415_17020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chit03021
]
FW415_17020
Transcription machinery [BR:
chit03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FW415_17020
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
PhyR_sigma2
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
QEH42480
LinkDB
All DBs
Position
4176882..4177469
Genome browser
AA seq
195 aa
AA seq
DB search
MPASSTYNGNELLARIAQGDAAIYPYLHDTYYNSLVYFSLSITQDQQQAEDIALDALVKL
WQAPARFESIGKLRSYLFTLARNASLNYLKHLRVRQRTAQELSGTEIPVDAQLESLVVES
DLMRLIYREVAGLPEPYRQVISLLYIEDLPSAEAAERLGISMENLRQRKGRAIKELKNKL
LRKGLGDLLPLLLFL
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
ttgccagccagttcaacatacaacgggaatgaattgcttgcgcgcatagcacaaggcgat
gctgccatatacccttatcttcacgatacgtattataattccctggtgtatttttccctc
agcatcacgcaggaccagcagcaggcggaggacattgcgctcgatgcactggtcaaacta
tggcaggcgccggcccgcttcgaatccatcggaaaattaaggagttaccttttcaccctc
gccaggaatgccagcctcaactacctgaaacacctgcgggtaaggcagcgcacagcacag
gaactttccggaacggaaataccggtagatgcccagctggaatcgctggtagtggaatcg
gacctgatgcgcctcatttaccgggaagtggccgggctccctgagccttaccgccaggta
atatcgctgctttacatagaagacctcccttccgccgaagccgcggaacgccttggcatt
agcatggagaacctccggcagcgcaaaggccgggccattaaggaactgaagaacaaactg
ctgcggaaaggtcttggcgaccttttacccctgctccttttcctgtaa
DBGET
integrated database retrieval system
