Chitinophaga sp. XS-30: FW415_17850
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Entry
FW415_17850 CDS
T06207
Name
(GenBank) peptidase domain-containing ABC transporter
KO
K20344
ATP-binding cassette, subfamily C, bacteriocin exporter
Organism
chit
Chitinophaga sp. XS-30
Pathway
chit02010
ABC transporters
chit02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
chit00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FW415_17850
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FW415_17850
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
chit01002
]
FW415_17850
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chit02000
]
FW415_17850
Peptidases and inhibitors [BR:
chit01002
]
Cysteine peptidases
Family C39
FW415_17850
Transporters [BR:
chit02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
FW415_17850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_29
AAA_21
RsgA_GTPase
AAA_30
AAA_23
AAA_16
DUF6079
ATP_bind_1
DUF87
AAA_15
nSTAND1
nSTAND3
DUF3987
DLIC
Motif
Other DBs
NCBI-ProteinID:
QEH42637
UniProt:
A0A5B9WPJ6
LinkDB
All DBs
Position
complement(4396906..4399077)
Genome browser
AA seq
723 aa
AA seq
DB search
MSATIRLKKSVRVRQRDISDCGAACLASVAAFYNLQLPVARIRQLAATDSKGTNVLGVIE
AANKIGFQAKGVKGPFEALFNIPKPAIAHVIVQEKLHHFVVICKVTKTHVVIMDPADGLY
HKMPHAQFSAMWTNVLILLMPDEAFQAGNEKVSHLQRFWFLLRPHRSVVLQALFGAMIYT
VLGLSTSIYVQKIIDNVLVEGNGNLLNLLGTIMLLILVLQFFIGHWKSIFALKTGQQIDA
RLILGYYKHLLRLPQQFFDTMRVGEITSRIGDAVKIRVFINDVAIGLVVNVFIVLFSFAL
MFTYYWKLALIVLAILPVYGIVYRISNQINKRMQRKLMEDNAELGSQLVESLNAAATIKR
FGLEEYANIKTESRFVRLLKTIFSSSVANLYIGNASSFITSAFVVILLWAGSYFVMDRQL
SPGELLSFYALIGYFTGPAMSLIGANRSLQDALIAADRLFEIMDLAQEETGNKVKLGPEL
AGDIVFQNVSFRYGTRVEVFRRFSLQIRKGKITAIVGESGSGKSTLMALLQNIYPLQEGS
IMIGNLDIRYIEHESLRRQVSVVPQQIDLFAGTVLENIAVGEFEPDMQKVLQISAQLGIL
HFIEKLPEGFNTMLGEHGVNLSGGQRQRLAIARALYRDPDILILDEATSSLDSVSDQYVQ
EVMQQLRDKGKTILVIAHRLSTVVNADKIVVLQEGVMAEEGTHSQLLQNNAIYSKLWHHH
QAI
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcaaccatcagattaaagaaaagcgtccgtgtacgccagcgggatatcagcgat
tgcggggctgcatgcctcgcatccgtagccgcattttataacctgcaactgcccgtcgcc
cgaatccgtcagctggcggcaacggacagcaaaggcaccaatgtgctgggcgtaatagaa
gccgccaacaagatcggctttcaggcaaaaggtgtgaaaggcccgttcgaagcgcttttt
aacatacccaagcccgccatcgcacatgtgatcgtacaggaaaaactgcaccatttcgtg
gtgatctgcaaggtgaccaaaacgcatgtggtgatcatggaccccgcagacggtctgtac
cataaaatgccgcatgcgcagttttcggctatgtggaccaatgtgctgatcctgctgatg
ccggatgaggcttttcaggcaggtaacgaaaaagtgtcccacctgcaacgcttctggttc
ctgctgaggccgcaccgctccgtggtattgcaggccctgttcggcgccatgatctatacc
gtcctcggtctctccacctccatctatgtgcagaagatcatcgacaatgtgctggtggaa
gggaatggcaacctgctgaacctgttgggtaccattatgttgctgatcctggtgctgcag
ttcttcatcgggcactggaaaagcatctttgcattgaaaaccggccagcagatcgatgcg
cggctgatcctcggatattacaagcatctcctgcggctgccgcagcaattctttgatacc
atgcgggtaggggagatcacttcccgtataggcgatgccgttaaaattcgtgtattcatc
aacgatgtagctatcgggctggtggtgaacgtgttcatcgtattgttctctttcgccctg
atgttcacttattactggaagctggcgctgatcgtactggccatattgccggtgtacggg
atcgtttaccgcatcagcaaccagatcaacaagaggatgcagcgcaagctgatggaagat
aatgcggaactggggagccagctggtggaatcactgaatgctgcagccaccatcaaacgt
ttcggattggaggaatatgccaatatcaaaaccgagagccgctttgtacggttgctgaaa
acgatcttctcctcatccgtggctaacctctatatcgggaatgccagcagttttattacc
agcgcttttgtggtgatcctgctgtgggccggctcctattttgtgatggaccggcagctc
agtccgggtgaattgctgagcttttacgcgcttatcggctatttcaccggcccggccatg
agccttatcggcgccaaccgcagcttgcaggatgcgttgatagcggcagaccgcctgttc
gagatcatggacctggcgcaggaggaaacgggcaacaaagtgaagcttggtccggaactg
gcgggagatatcgtttttcagaacgtatccttccgttatggcacccgggtggaagtattc
cggcgcttctccctgcagatccgcaaagggaagatcacggcgatcgtgggagagagcggt
tcggggaaatccacgctgatggcattgttgcagaatatctacccgttgcaggaaggcagc
atcatgatcggcaacctggatatccggtatatagaacacgagagcctgcgcagacaggtg
agcgttgtgccgcagcagattgacctgtttgcgggaacggtgctggagaatatcgccgtg
ggcgaatttgagccggatatgcaaaaggtattgcagatatcggcgcaattggggatactc
cattttatagagaaactgcctgagggttttaacacgatgctgggcgaacatggcgtaaac
ctctctggcggccagcgtcaacggctggctattgcaagggcgctgtaccgtgatccggac
attctcatactcgatgaagctacttcttccctggattccgtttccgatcaatacgtacag
gaagtgatgcagcaattgcgggataaaggcaagaccatcctcgtgatcgctcaccggctg
agcacggtggtcaatgcggacaagatcgtggtattacaggaaggggtgatggcggaggaa
ggtacgcacagccagctgttgcagaacaatgcgatctactcaaaactctggcaccatcac
caggcgatctga
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integrated database retrieval system
