Chitinophaga sp. XS-30: FW415_18315
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Entry
FW415_18315 CDS
T06207
Name
(GenBank) TonB-dependent receptor
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
chit
Chitinophaga sp. XS-30
Brite
KEGG Orthology (KO) [BR:
chit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chit02000
]
FW415_18315
Transporters [BR:
chit02000
]
Other transporters
Pores ion channels [TC:
1
]
FW415_18315
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CarbopepD_reg_2
TonB_dep_Rec_b-barrel
Plug
CarboxypepD_reg
TTR_TEN1-4
RMI1_C
Motif
Other DBs
NCBI-ProteinID:
QEH42722
UniProt:
A0A5B9WQ73
LinkDB
All DBs
Position
4527697..4530777
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AA seq
1026 aa
AA seq
DB search
MKLLYNKLCVLLTALTLPLCIMAAGAYGQSLTGKVVDAEDNTPLPGVSIQVKGTTKGTAT
ISDGSFRLDVAATDVLVISFMGYASQEVPVNGQSSLTIRLRPSATGLDELVVVGYGTQKK
KLLTGATVQVDSKDLVRNHTLGVEQALQGQAAGVQITSNSGQPGDAMKFNIRGIGTNGNS
QPLFIVDGFPTDDISYLNPADIATIDILKDAASTAIYGTRAANGLVMITTKRGNAGGMRA
TFDASFGWQNPAKKLDLLTGEQYGIIVNEAAINSGRAPIYTLEQIKQLGRGTDWQAAATN
SNAPIQNYSLGLAGGNNTSTFSSSLSYQAQDGVIGIRGNSKFSRITFRINSEHRLYKDIF
KVGQNLTYSRADQSGIGTGNIYNNSIRGLLNTSPTFPVFDSTGKYGKSSLSADEANPIGM
MDYNNNNKRIADRILGNVYLDAAILKHLRFRTDIGVDIAFVTDNSFVPVYELATNNTNPN
SYATMGAYRNFTWNWENTLTWQQNFGKHDLTVLAGTTARKFNGFNVSGRKEDLIIPDFDH
AIIDNGTNDLTQKTYGARSVHILQSYFGRVNYSFDDKYILSATLRTDGSTRFGTNNRYGT
FPAFSAGWIVTNEDFMDISWLDHFKVRGGWGQNGNDRIGDFAYLATVSSAWRSYYFGNGS
DVPKSVGASPDKIPNPDLRWEASQQTDIGFDATLFNSLNITFDWYNKTTKDWLVAPPIPD
IVGTGAPYINGGKIVNKGIEIAANYTHKFGELSIGIGGNISFNRNKVLEVPNQEGILHPE
YNNVLSSNMDEYYLAQNGFPIGYFFGLKTAGIFQNQQEIDSYRSKDGNPIQPSAQPGDVR
FVDLNEDGVIDRNDKTMVGNPNPQQTYGINLNADWKGFDIAILLTGVGGNQIVDGTRSYD
RFYNNFTTAVFDRWTGEGTSNYLPRLTMGDEANGNWSKFSDLYVRNGSFMRIKSVNIGHD
FKRSIGKRLPVQQLRLYVSGLNLYTFTHYRGLDPEVGFGVDPWSSGTDLGYYPQPRTLLV
GLNVKF
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgaaactactgtacaacaaattatgtgtgctcctgacagcgctgaccctgccgctctgc
ataatggctgcgggcgcttacggccagtcccttaccggcaaggtagtggacgccgaagac
aatacgcccttacccggcgtatccattcaggtaaaaggcactaccaaaggcactgccacc
atctccgatggctcgttccgcctggatgttgcggctacggacgtcctggtcatctccttc
atgggctacgccagtcaggaagtacctgttaacgggcaatccagcctcaccatccgcctc
cggccctccgctaccgggctggatgaactggtggtagtcggttacggcacccagaaaaag
aaactgctgaccggcgctaccgtacaggtagacagcaaagatctcgtgaggaatcatacc
ctcggcgttgaacaggcactgcaagggcaggccgccggtgtgcagatcacctccaattcc
ggacagcccggcgatgccatgaaattcaatattcgcggtatcggcaccaacggcaattcc
caacccctgttcattgtggacgggttcccaacggatgacatctcttacctgaacccggcg
gacatcgccaccatcgacatcctcaaagatgccgcgtccacagccatctacggtacccgc
gcggccaacggcctcgtgatgatcaccacgaagcgagggaacgccggcggcatgcgtgca
acctttgatgcctcctttggctggcagaacccggccaagaagctggacctgctcaccggt
gaacaatatggtatcatcgttaatgaagcggccatcaattccggcagagcacccatttat
acattggaacagatcaaacaactcggcaggggaacagactggcaggcggcggcaaccaac
agcaacgcgcctatccagaactacagcctcggcctggcaggtggaaacaacacctccacc
ttttcctcatccctctcctaccaggcgcaggacggcgtgataggcataaggggcaactcg
aagttctcccgcatcaccttccgcatcaactcggaacaccgtctctataaagatattttc
aaagttggccagaacctcacctactcccgtgccgatcaaagcggcatcggcaccggcaac
atctacaacaactccatccgtggcctcctgaacaccagtcccacttttccggtattcgat
tccaccggcaaatacgggaagtcatcgctgagcgcggacgaagccaatccaattggcatg
atggactacaacaataacaacaaacggatagcggacaggatactcggcaatgtgtacctg
gatgcggccattctgaaacatctccgcttccgtacggacatcggggtagatatcgcgttc
gttaccgacaattcattcgtaccggtctatgaactggccacgaataacaccaatcccaat
tcctacgccaccatgggcgcataccggaattttacctggaactgggaaaatacgctcacc
tggcagcagaacttcggcaaacatgacctcacggtgctggccggtaccacggcccggaaa
ttcaacggctttaacgtcagcggcagaaaggaagacctgatcatcccggacttcgatcat
gccatcatcgataacggcacgaacgaccttacccagaagacctacggcgcccgctccgtg
catatcctgcaatcttacttcggaagggtgaactacagctttgatgataaatacatcctc
tccgccaccctgcgcacagatggctccacccggttcggtaccaataaccggtacggcacc
ttccccgcattctccgcaggctggatcgttaccaacgaggatttcatggatatcagctgg
ctggaccatttcaaggtccgcggcggatggggacagaacggcaatgaccgcatcggtgat
ttcgcctacctggccactgtcagctccgcctggcgctcctactatttcggcaacggctcc
gatgtgcccaagtccgtaggcgcctcgccggacaaaatacccaatcccgatctccgctgg
gaagcctcgcagcaaaccgacatcgggtttgacgctacgctcttcaacagcctgaacatc
accttcgactggtataacaaaaccacgaaagactggctggtagcaccgcccattccggat
atcgttggcaccggcgctccctatatcaacggtggaaagatcgtgaacaaaggcatagag
atcgctgccaactatacccacaagttcggtgagctgagcatcggcatcggcggcaacatc
tcgttcaaccggaacaaggtgctggaagtccccaaccaggaaggcatccttcatcctgaa
tataacaacgtactgtcttccaacatggatgaatattacctcgcgcagaacggattcccc
atcggttatttcttcggcctgaaaaccgccggtatcttccagaaccagcaggaaatagac
agctaccgctccaaagacggcaacccgatacaaccttccgcccaacccggcgatgtgcgt
tttgttgacctgaatgaggacggggtgattgaccggaacgacaagaccatggtaggcaac
ccgaacccgcaacagacgtatggcatcaatctgaatgccgattggaaaggttttgacatt
gccatactgctcaccggcgtgggcggcaaccagatcgtagacggcacccgttcttacgac
cgtttctataataacttcaccaccgccgtatttgaccggtggaccggcgaaggcacctcc
aattacctgccccgtttaaccatgggtgacgaagcaaacggcaactggagcaaattttcc
gacctctatgtgcgcaacggctcattcatgcggatcaagagcgtaaatatcgggcatgac
ttcaaaagatcgatcggcaaaaggctgccggtacaacagttacggctatacgtttccggc
ctgaacctttatacgttcacccactaccgcggtctcgacccggaagtagggttcggtgta
gatccctggtcttccggcacggacctgggctactatcctcaacccaggacgctcctggta
ggtcttaatgtcaaattctaa
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