Chitinophaga sp. XS-30: FW415_19665
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Entry
FW415_19665 CDS
T06207
Name
(GenBank) TonB-dependent receptor
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
chit
Chitinophaga sp. XS-30
Brite
KEGG Orthology (KO) [BR:
chit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chit02000
]
FW415_19665
Transporters [BR:
chit02000
]
Other transporters
Pores ion channels [TC:
1
]
FW415_19665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CarbopepD_reg_2
Plug
TonB_dep_Rec_b-barrel
CarboxypepD_reg
STN
TTR_TEN1-4
Big_1
CooC_C
FecR_C
DUF2969
DotD
Motif
Other DBs
NCBI-ProteinID:
QEH42965
UniProt:
A0A5B9WSS8
LinkDB
All DBs
Position
complement(4857889..4861128)
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AA seq
1079 aa
AA seq
DB search
MRLTTILLLTFLMESSAEGFSQQRITLSRKDAAIRQVFQDIRKQTGYDFLYSNKVLASAR
PVSVSVQDATLDEVLRLVMKDQPLAYNIVEKTVIVKLYERPATRDTVPSIPVSGLVSDDK
GQALPGVTVQVKGTSAGTVTDNDGKFSITVSGSDAVLEFSYLGFARQERPVGTTTVFNIT
LQPSNEGLNEVVVVGYGTVMKKDLTGSLTQVKSREINAVPAANVLQALSGRAAGVHVLQN
NGSPGGPVSVRIRGTNSIMGSNEPLYVVDGFPVSGTNPTVLNNMDIETIDILKDASATAI
YGSRGANGVVLITTKRGKAGKTKVDFETSYSTQSLRKKLDLMNAKEYAIFYNERAVNDNQ
QPYFTQEQIDNFGEGYDWQDLVFQTAPMQLTSLNVSGGNEKTQFSLSGSVFAQNGIVKGS
DYNRYSLRTNINHEISKKFSVNFSGTFSRLQTDRKDSRGGSRGNSMIAAAISAPPTLTPY
NDDGSYRVLATAYPFIATDLINPINFINEQTTSTKANVVLANAALIYHPLPDFTVKISGG
IENRDDRTDTYTTTRFVNSQGVASVGASQFTSLLSENTISYNKTAGKHNIAAVAGFTYQD
FLTTFVNGRGVGFLSDASQTYDLGAADAPGIPGSGYAKSALVSLLARVNYSYDNKYLATI
SFRQDGSSRYSEGNKWGGFPSAAIAWRVSEEDFLKDIGFFSDLKLRASWGYTGSQAISPY
ATLNQLGSGKTVFDDALATTYAPGTVLPGDLKWETTEQKDIGLDIGILDNRVVVTADYYV
KTTKDLLNNVILPSSMGFQRTVRNVGEVRNQGFEFGVDARILTGAFKWDLNTNISMNRNK
VLKLYDGEDILGGSVNAVVVSDISNILREGQPIGRFWGYLEDGYDDNGRIRFVDVDKDGS
ITAQDKTYIGDPNPDFIYGINSNMSYRNFSLSIFIQGSQGNDIFNISSIGNTIDYGFGLN
MPREVYENHWTPSSPNAKYPVISYNTTVRASDRFVEDGSYMRLRNVELGYDLPVQKAGIN
WLRNLRIYASGQNLLTFTKYSWWDPEVNSNGGENSTAQGYDNYSYPTARSFTFGIRAGF
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgcgattaacaaccatccttctgctgacttttcttatggaatcaagcgctgaaggcttt
tcgcaacagcggatcaccctttccaggaaggatgccgccatccggcaggtattccaggat
atccgcaaacaaacgggctacgattttctctacagcaacaaagtgctggcttctgccagg
ccggtttccgtttccgtacaggatgccacgctggatgaggtgctgcgcctggtcatgaaa
gatcagccgctggcgtacaacatcgtggaaaagaccgtgatcgtcaaattgtatgaacgt
cccgctacacgggatacggtgccatccataccggtcagcggactggtcagcgatgacaag
gggcaggcgctgcccggggttacggtgcaggtaaaaggcacttctgccggtaccgtcacg
gataacgacgggaagttcagcatcaccgtgtccggcagtgacgccgtgctggaattctcc
tacctgggcttcgcccggcaggaacgcccggtaggcacaacaacggtttttaacatcacg
ctgcagccatccaatgaaggattgaacgaagtagtggtagtaggttatggtacagtgatg
aaaaaagaccttaccggttcgctgacccaggtgaagtccagagagatcaatgccgtgcct
gccgccaacgtgttgcaggcgctttccggccgcgccgccggtgtacatgtgctgcagaac
aacggttcgcccggtggcccggtgagcgtacggatcaggggcaccaactccatcatgggc
agtaacgagcctttgtatgtggtggacggttttccggtgtccggtaccaatccaaccgtg
ctcaacaatatggacatcgagaccatcgacatcctcaaagatgcgtccgccacagcgatc
tacggttcccgcggcgccaacggcgttgtgctcatcaccaccaaaagagggaaagcgggt
aaaacgaaagtggacttcgaaaccagctacagcacgcaatccctgcgtaaaaaactggac
ctgatgaacgcaaaggaatatgccattttctataatgaaagggcagtgaacgataaccag
caaccctatttcacgcaggaacagatcgataatttcggggaagggtatgactggcaggac
ctggtattccagaccgctcccatgcagctgaccagcctgaacgtcagcggcgggaatgaa
aaaacgcagttctccctttccggcagcgtatttgcacagaacggcattgtaaagggcagc
gattataaccgctattccctgcgcaccaatatcaatcatgagatcagcaaaaagttcagc
gtcaatttctccggcaccttctcccgtttgcagacagaccgtaaggatagtcgcggtgga
agccggggcaattccatgatcgccgcggctatttcagcgccgcccacgctgacgccttat
aacgatgacggctcttaccgggtactggcaacggcttatcctttcatcgcaacagatctt
atcaatcccatcaattttatcaatgagcagacgaccagcaccaaagcgaatgtggtactg
gcgaatgccgcactgatctatcatccgctgcctgattttaccgtgaagatctccggcggc
atagagaaccgggacgaccggaccgacacgtacaccaccacccgcttcgtcaattcccag
ggtgtggccagcgtgggcgccagccagttcaccagcctgctgagcgagaacaccatcagc
tataataaaaccgcaggcaagcacaatattgcagctgtagcgggttttacctaccaggac
tttctgaccacctttgtcaacggcagaggcgttggctttctgagcgatgcgtcccaaacc
tatgatctgggagcggccgatgcgccgggcatacccggttcagggtatgcaaaatcagcc
ctcgtatcattgctggcaagggtgaactacagttacgacaataaatacctggcaacgatc
agtttccggcaggatggatcttcccgttacagtgagggcaataaatggggagggtttcct
tccgcagccattgcatggcgtgtttcggaggaagatttcctgaaggatatcggtttcttc
tcagacctgaagctccgtgccagctggggctataccggcagccaggccatcagtccatat
gccacgcttaaccagcttggctccgggaaaaccgtgtttgacgatgcgctcgccactacc
tacgcgcccggcaccgtgttgccaggtgacctgaaatgggagaccaccgaacagaaggat
atagggttggatatcggcatactggacaacagggtagtagtcaccgcggattattatgta
aagacgacaaaggacctgctcaacaatgtgatcctgccatcttccatgggcttccagaga
acggtgcgcaatgtgggcgaggtcaggaaccagggatttgagttcggtgtggatgccagg
atattgaccggtgcatttaaatgggacctgaacacgaacatctccatgaaccgtaataaa
gtgctgaaactgtatgacggcgaagatatcctgggcggaagcgtgaatgccgttgttgtg
agcgatatcagcaacatcctccgggaaggccagccgatcggccgtttctggggatacctg
gaggacgggtatgacgacaatggccgtatccgttttgtggatgtggataaggacggatcg
atcactgcgcaggacaagacctatattggtgatcccaacccggatttcatctatggcatc
aattcgaacatgtcttaccgcaatttctccttaagcatttttatacagggttcgcagggt
aacgacatcttcaatatcagctcaatcggcaatacgatcgattatggttttggcctgaat
atgccgcgggaggtctacgagaaccactggacgccttccagtccgaatgcgaaatatccc
gtcatcagctataacactacggtaagggcatcggacaggtttgtggaagatggttcctac
atgcggctgagaaatgtggaactggggtatgaccttccggtacagaaagcggggatcaac
tggctgcgaaacctgcggatatacgccagcgggcagaacctgctcacgttcaccaaatat
tcctggtgggacccggaggtgaattccaatggcggcgagaactcaaccgcacagggatat
gacaattacagttatcccacagcgcgatctttcaccttcggcatcagggccggtttctag
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