Chitinophaga sp. XS-30: FW415_20965
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Entry
FW415_20965 CDS
T06207
Name
(GenBank) TonB-dependent receptor
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
chit
Chitinophaga sp. XS-30
Brite
KEGG Orthology (KO) [BR:
chit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chit02000
]
FW415_20965
Transporters [BR:
chit02000
]
Other transporters
Pores ion channels [TC:
1
]
FW415_20965
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CarbopepD_reg_2
Plug
CarboxypepD_reg
MG4
MetallophosN
TTR_TEN1-4
Big_1
Motif
Other DBs
NCBI-ProteinID:
QEH43201
UniProt:
A0A5B9WTD3
LinkDB
All DBs
Position
complement(5208333..5211464)
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AA seq
1043 aa
AA seq
DB search
MSNYLPLSLCPRWLRVRWILLAMAPAGLCIQAPATASAAFYQQQQPVVIKGRVTDDQNLP
LPGVTVSLKGSGTGTTTDANGDYTLRSNTPNGVLVFSFIGYARQEVPFSGAGIRNISMKS
DQKALGEVVVVGYGTQKKVNLVGAVSAVKVDEKIAGRSLPNASSALSGLVPGLAVNQSTG
MAGRNSATLLIRGLGSVNNAGPLIVVDGMPDVDLNRINLNDIESISVLKDATSASVYGSR
AANGVILVTTKSGKGQRRPQINFNGNLAIVKPTRAYQFMADYPRALTLHQRGAAVNALRS
NYLFKDGTIDQWMALGMIDPLRYPNTDWWDVISRTGNIQNYNVSASGGGDNSNFFISVGV
QDEKGLQINNDYKLYNARFNYDYKLRKNMNVGVRFNGNWSKFTYALEDGFTDDNATNTAG
FDLQYAIAGITPYDPATGYYGGVMAYNEDPQAYNPYTVYTNALSRQNRQEANGSIYFDWS
PVKGLTGRVDYTLNYNNQFRWNANMPNRSFNFQNNAFGSRVYVGENAGVGNFTNTGYKTM
MTGRLNYQRKIGEHHEINVLGVYSEEYWYTRYQGSSRNDRLHPSLHEIDAALTDIQSTGG
NSSAEGLRSYIGRLNYTAFDKYLFEANFRYDGSSKFLDGSRFGFFPSVAIGWRFTEENFI
SNFTKSFLNSGKLRVSYGGLGNNAGVGRYEQQETLNASNYMIDGDIVRGFVYEKMVNQGL
SWEANTVFNIGLDLAFLDSRLTTELDYYDRLTVGMLRPSEFSILLDGAYQAPRANIGDLR
NRGVEANITWSDKVGQFRYGVNLNASYNRTVLEKWNEFLGKGWIFLDMPYHFLYTYEDIG
IAQTWEDVYNATPQGASPGDILRKDLNGDGRITGEDRKAYPNQQRDRPTTNFALNTNLSW
KGIDVAFLFTGATGRKDYWLNNYNNVNFGTQRYAMTWEHWNNPWSWENRNGEWPRLLGSG
NREETSFWLDDMSYIRLKNIQVGYTIPAKLLNRIGVNSFRIFGSTENVATITGYRGLDPE
LTGNRSNAYPLNKSYSIGVNVSL
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaattacttaccactttctctatgcccacgctggttacgcgtcaggtggatattg
ctggccatggctcctgccggcctctgcatccaggcacctgccacagcgtcggctgcgttc
tatcaacagcaacaacctgttgtgatcaaaggacgcgtaacagatgatcagaacctgcca
ctgccaggtgttactgtatcgctgaaaggttccggcacgggcaccactaccgatgccaac
ggggattataccctgcgcagcaacacccccaacggtgtgctcgtattttcttttatcgga
tacgcccggcaggaagtgccgttttccggcgcgggcatccgcaacatttcaatgaagtct
gaccagaaggcgctcggcgaagttgttgtagtaggttacggcacacagaaaaaagtcaac
cttgtgggtgcggtatccgccgtgaaggtggatgaaaagatcgccggccgttcattgccg
aatgcttcctccgctctgtccggcctcgttccgggccttgccgtaaaccagtctaccggc
atggcaggaaggaactccgccacattgctgatccgcggcctcggctccgtgaataacgcc
ggccccctgatcgttgtggatggtatgccggatgtggacctgaaccgtatcaatctgaac
gatatcgaaagcatttccgtgctgaaggatgcgacctccgcctccgtgtacggttcccgc
gcggctaacggtgtcattctcgtgaccaccaaatccggtaaaggccaacggaggccccag
atcaatttcaacggcaacctggccattgtgaagcctaccagggcataccagttcatggcg
gattatccgcgcgcgcttacgctgcaccagcgtggcgctgcggtgaatgccctccggtcc
aactacctctttaaagatggtacgatcgatcagtggatggcgctgggcatgatcgacccg
ctccggtatccgaatacggactggtgggatgtcatttccagaacgggtaatatccagaat
tacaacgtttccgcttccggcggcggcgacaactccaacttctttatctctgttggcgta
caggacgaaaaaggtttgcagatcaataatgattacaaactctacaatgcccgtttcaac
tacgattacaaactgcggaagaatatgaacgtaggcgtccgcttcaatggcaactggtcc
aaattcacctatgccctggaagacggttttacggacgataacgcaacgaacacggcgggt
ttcgacttgcagtacgccattgccgggatcaccccttatgatcctgctacaggctattat
ggcggtgtgatggcctataatgaggacccccaggcatacaatccctacacggtgtacacc
aacgccctcagccgccagaacaggcaggaagcgaacgggagcatctatttcgactggtct
cccgtaaaaggactgaccggccgtgtggattataccctgaactacaacaaccagttccgc
tggaatgccaatatgcccaaccgttccttcaacttccagaacaatgcctttggcagccgt
gtgtatgtaggagagaacgccggcgtcggcaactttaccaataccggttacaagaccatg
atgaccggccgcctgaattatcagcggaaaataggagagcatcacgagatcaacgtactc
ggcgtgtatagcgaagagtactggtacacccgctaccagggctccagccggaacgaccgt
cttcatccttcactgcacgagatcgatgctgccctgacggacatccagtccaccggcggc
aactccagcgcggaagggcttcgttcctacatcggccgcctcaattatacggcgttcgac
aaatatctcttcgaagccaatttccgttacgatggttcttcaaaattcctggatggcagc
cgtttcggtttcttcccctccgtggccatcggatggcgctttacagaagaaaatttcatc
agcaacttcaccaaaagtttcctcaacagcggcaagctgagggtttcctacggcggactg
ggtaacaatgccggcgtaggcaggtacgagcagcaggaaacgctcaatgccagcaactac
atgatagacggtgatattgtacggggatttgtgtacgagaaaatggtgaaccagggcctt
tcctgggaagccaataccgtgttcaatatcggtcttgatctggccttcctcgatagccgc
ctgaccacagaactggattattatgaccgcctcactgtaggtatgctgcggccctccgaa
ttctccatcctgctggatggtgcataccaggcgccccgcgccaatatcggagacctccgc
aaccgcggtgtggaagccaacatcacctggtcggacaaagtaggccagttccgttacggc
gttaatctgaacgcttcctacaaccgtaccgtactggagaaatggaacgagttcctcggc
aaaggatggatcttcctggacatgccttaccatttcttatatacgtatgaagatatcggc
atcgcccagacctgggaagatgtgtacaatgccacaccacaaggcgcttctcccggcgat
atcctgcggaaagacctgaatggcgatggcaggatcaccggtgaggacagaaaggcgtat
cccaatcagcagcgtgaccggcctacgaccaactttgcgctgaacaccaatctttcctgg
aaaggaatagatgtggccttcctgttcaccggcgccaccggccgaaaggattactggctg
aacaactataacaacgtcaacttcggcacgcagcgttatgcgatgacatgggagcactgg
aacaatccctggtcatgggagaaccgtaacggggaatggccccgcctgcttggaagcggc
aaccgggaggaaacctctttctggctggacgacatgagctatatccgcctgaagaacatc
caggtgggatatactataccggcaaaattgctgaaccggataggcgtgaacagtttccgc
atcttcggttcaacggagaacgtagccaccattaccggctaccgcggtctggacccggaa
ctgaccggcaacaggagcaatgcatacccgctcaacaaatcttactccatcggtgttaac
gtgagcctttaa
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