Chitinophaga sp. XS-30: FW415_21235
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Entry
FW415_21235 CDS
T06207
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
chit
Chitinophaga sp. XS-30
Brite
KEGG Orthology (KO) [BR:
chit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chit02000
]
FW415_21235
Transporters [BR:
chit02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
FW415_21235
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
DUF5382_C
Motif
Other DBs
NCBI-ProteinID:
QEH43250
UniProt:
A0A5B9WTV9
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Position
5279661..5281334
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AA seq
557 aa
AA seq
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MKKTLLTILALNLTMLYSCGNKFLDVKPRNELTDATFWKTEQDATLALNGCYRLWEAYAN
IVLFDGASDNAYEKSNFGFQVLGNGTLTASNYHVLGSWIDWFHFMDENGGGDFAASVNWY
PYTRIRKYNNFLANIDRVPMDDAKKAQYKSEVRFLRAYDYFWKVMLHGDVPLVTKVINAT
DELPRDPAEKVKQFVLDELSAIISEGALPVQNTIDSKGHVTKGAALALKARLELVMGNYA
AAMADAKAVIDMPCYELFPNYRDLFLEKSEGINKEAILNVQYIVNDYEQSLTQLNLPAGD
GGWSALNATKSMVDAYECSNGKPITDPTSGYDIDDPFRNRDPRMEMSLLHPGQLWKGRYY
NTLDQFMPDGSPNPDYNRNEPAARSGMNVIKYINSLADSPGGWPPNFGGDIMVIRLAEMY
LTYAEAAVETNTNTAAALDYVNAVRTRSGHIKATALTRALVRNERRVELAFEGLRYLDIM
RWDLGPQVLNGPLYGSRRGTMDFTDGSITWVGNGYEVNDVNYIKLETRTFHPVRKYLFPI
PQAEMDANSKMVQNPGY
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagacactattgacaatacttgcgcttaaccttaccatgttatactcctgcggg
aacaagttccttgatgtgaaaccaaggaacgaactgacggatgcgaccttctggaaaaca
gagcaggatgcaacactggcgctgaatggctgttaccggttatgggaagcctatgcgaat
attgtgctgtttgacggcgccagcgacaatgcttatgaaaaatccaatttcggcttccag
gtactgggcaacggaacattaacggcatcgaactatcatgtgctgggcagctggatcgac
tggttccattttatggatgaaaatggcggaggagactttgctgcatctgtcaactggtac
ccttatacacgcatccgcaaatacaataattttcttgccaatatagacagggtgccgatg
gatgatgcgaaaaaggcacaatacaaaagtgaagtgagattcctgcgggcatacgactat
ttctggaaagtaatgttgcatggagatgtgccgctggttacaaaagtgatcaacgcaacg
gacgagctgcccagggaccctgccgaaaaagtaaagcagttcgtgcttgacgagctgtcc
gctattatcagcgaaggcgcattgccggtccagaatactattgactcaaaagggcatgtt
accaaaggcgcggcattggcgttgaaggccaggctggaactggtaatgggaaattatgcc
gctgccatggccgatgccaaagcggtaattgatatgccctgttacgagctgttcccgaat
taccgggacctgttcctggaaaaaagcgaggggatcaacaaagaagcgatcctgaacgtg
caatatattgtgaatgattatgaacaatcgctcacacagctgaaccttcctgccggagat
ggcggctggtctgccctcaatgccactaaaagcatggtggacgcctatgaatgcagcaac
ggaaaacctattaccgacccaacatccggttatgacatcgatgatcctttcaggaaccgc
gatcccaggatggaaatgtccctcctgcatccggggcagttatggaaagggcgttattat
aatacgctggaccagttcatgccggacggcagccctaacccggattataacaggaacgag
cccgcggcccggtcaggtatgaatgtcatcaaatacatcaacagtcttgccgatagcccg
ggtggctggcctcccaattttggcggtgatattatggtgatccgcctggcggaaatgtat
ctcacctatgcggaggccgcagtggaaaccaataccaataccgctgctgcacttgactat
gtcaatgccgtcagaacaagaagcggtcatatcaaggcaacggctttgacaagggcactg
gtgcggaacgaacggagggtggaactggcctttgaagggctccggtacctggatatcatg
cgctgggaccttgggccacaggtgctgaacggccctttatacggcagccgcaggggaacg
atggactttacggacggcagcatcacctgggtgggaaacgggtacgaagtgaacgatgtg
aactacatcaagcttgaaacgcgtacgttccacccggtaagaaagtacctgtttcccata
ccacaggcggaaatggatgccaactcaaagatggtgcaaaaccccgggtattaa
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