Chitinophaga sp. XS-30: FW415_21410
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Entry
FW415_21410 CDS
T06207
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
chit
Chitinophaga sp. XS-30
Brite
KEGG Orthology (KO) [BR:
chit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chit02000
]
FW415_21410
Transporters [BR:
chit02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
FW415_21410
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Ortholog
Paralog
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
SusD-like
TPR_19
Motif
Other DBs
NCBI-ProteinID:
QEH43281
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Position
complement(5326821..5328359)
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AA seq
512 aa
AA seq
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MRYACIYLSLVKAKLKKDTGNATTGLVLLLVLAGCLFSTASCKKLVDISDPVDRITSGTA
FSSDELAGMAMNGVYTTMMTSGFVKRPITLYASLSSDELLKVNAIAFDPEALMAANRLTL
EGVAPDAGFITDATWNAGYAVIYAANAVIEGIAASTSGDLHEPVRKALTAEAKCIRALCY
FYLVNFYGDLPLVSTTEYSDAALIERSSKQQVYEFIIADLKEAETALPEDYAAAGGERIR
VNKWAAAALLAKAYLFNGNYPEAVAAAGRVIDNSGLYGLERNLDSVFLKNSREAIFQFKQ
NTNDVGLGNATDDGLALLPFNLVNPAIGYCLSNELLRAFDPSDKRRDRWVDSIVVAAGSG
PTARTDTFFYAAKYKTGQYNRVRNAVPTEYYMLLRLAEMYLVRADANARANAGQPAAAVA
DLNTIRARAGLPALPSSLSGEALLAAVAHEWQTEFFCEKGQRWFNLKRTGEARNVLSAIP
AKQPWAGDEQLLYPIPPKDINFNHRLKQNPGY
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgagatacgcttgtatatatctgtcattggtgaaggccaaactgaaaaaagacacagga
aatgcaacaaccggtcttgttctgctgctggttctggccggctgcctgttcagcacggca
tcctgtaaaaagctggtggatatttcagaccctgtcgatagaataacttccgggaccgcc
ttcagttccgatgagctggccggaatggccatgaatggtgtttacactactatgatgacc
agcggcttcgtgaaacgccccattaccctgtatgcatcgctttcatcggatgagctttta
aaggtgaacgccattgcatttgaccccgaagccctcatggcagctaaccgcttgaccctg
gaaggcgttgcgccggatgccggttttattacagacgctacgtggaatgcggggtatgcg
gtgatctatgccgccaatgcggtgatcgaaggcattgccgcatccacctccggcgatctg
cacgagcccgttcgtaaagcactcacagccgaagccaaatgtattcgcgccctctgctat
ttttatctcgttaatttttatggtgaccttccacttgtgtcaaccaccgaatatagtgac
gcagcgctgatcgaacgaagcagcaagcagcaggtttacgagttcatcatcgcggacctg
aaggaggcggagacggcgttgccggaagactatgccgcggccggaggggaaaggatcagg
gtcaacaaatgggccgcggcggcgctgctggctaaagcatacttgtttaacggcaattac
ccggaagctgttgcggctgccggcagagtgatcgacaattccggtttgtatggcctggag
cggaacctggatagtgttttcctgaaaaacagcagggaggccatctttcagtttaagcaa
aatacaaatgatgtcgggttggggaacgcaacagacgatgggcttgccttgcttcccttc
aatcttgtcaacccggctatcggatattgcctgtcaaacgagctgttgcgtgcattcgac
ccgtccgacaaacggcgggaccgctgggtagacagtatcgttgttgctgccggttccggt
cccaccgccagaacggacacgttcttctatgctgcgaagtataaaacggggcaatataac
agggtgcggaacgctgtgcccacggaatactatatgttgctccggctcgctgaaatgtac
ctggtaagggccgatgccaatgcaagggccaatgccggacaaccggctgctgctgtggcg
gacttgaatactataagggccagggccggtctgccggcattgccctcttccttgtcagga
gaagcgctgctggcggccgtggcacacgaatggcaaaccgaattcttttgtgaaaagggg
cagcgctggttcaatctgaaacgcaccggcgaggccaggaacgtactttcagccatacct
gcaaagcagccatgggccggggatgagcaattgctgtaccccatccctccgaaagatatc
aactttaatcaccggttaaaacagaacccgggctactga
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