Chitinophaga sp. XS-30: FW415_22205
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Entry
FW415_22205 CDS
T06207
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
chit
Chitinophaga sp. XS-30
Brite
KEGG Orthology (KO) [BR:
chit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
chit03016
]
FW415_22205 (truB)
Enzymes [BR:
chit01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FW415_22205 (truB)
Transfer RNA biogenesis [BR:
chit03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FW415_22205 (truB)
Prokaryotic type
FW415_22205 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QEH43418
UniProt:
A0A5B9WS01
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All DBs
Position
5548458..5549144
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AA seq
228 aa
AA seq
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MSLPNNYQEGAVLLINKPLTWTSFDVVRKIRNTTKAKIGHAGTLDPLATGLLICCTGKMT
KKINEYQAQEKEYTGTFTLGATTPTYDLESTPENHQPVPELDKAALQAYADRFTGELQQL
PPIHSAIKQNGKPIYHLARKGVDVKVEPRNITIYAFEITEVALPIVHFRVQCSTGTYIRS
LAHDFGAAIGCGAHLSSLCRTRIGLFKLEDAMEVTDFIEQYKQAHQNG
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgtctttacccaataattaccaggaaggcgctgtgctgttgatcaacaaaccgctgaca
tggacttcctttgatgtggtccgcaagatccgtaataccaccaaggcgaaaataggccat
gccggcacactggaccccctggccaccggcctcctcatctgctgcaccggcaaaatgacg
aagaaaataaacgaataccaggcccaggaaaaggaatacaccggaacattcaccctaggc
gctaccacaccaacgtacgacctggaatccacccccgagaaccatcagcccgtacccgaa
ctggacaaagcggcattacaggcgtatgccgaccggttcaccggtgaattgcagcagctg
cctcccatccactccgcgatcaaacaaaacgggaaacccatttaccatctcgcccgcaaa
ggcgtggacgtgaaggtggagccacgcaacattaccatatatgctttcgagatcactgag
gtggccttacccatcgtacatttcagggtgcagtgcagcaccggtacctatatccgctcc
ctcgcgcacgatttcggtgcggccataggttgcggagcgcatctgagcagcctctgccgc
acgagaataggccttttcaaactggaagatgccatggaggtaacggatttcatcgagcag
tataaacaggcacatcagaacgggtaa
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