Chitinophaga sp. XS-30: FW415_22895
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Entry
FW415_22895 CDS
T06207
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
chit
Chitinophaga sp. XS-30
Pathway
chit02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
chit00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FW415_22895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chit03021
]
FW415_22895
Transcription machinery [BR:
chit03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FW415_22895
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
HTH_DeoR
HTH_11
Sigma70_ECF
CemA
HTH_23
HTH_Mga
HTH_20
HTH_Tnp_ISL3
HTH_AsnC-type
wHTH_Par
HTH_24
DEAD
Motif
Other DBs
NCBI-ProteinID:
QEH43543
LinkDB
All DBs
Position
5695881..5696465
Genome browser
AA seq
194 aa
AA seq
DB search
MDKFPDNRLIALIRENNQLAFTALVNRYWEGLYRHIHARIGHEEDTKDILQEIFISAWKS
RETIYTDANGTIASYLFKAARYAIINYFSRPQQTICNEALLESLLLHQSTGSALEMLETK
ELEQQVIDELDRMPERLQLPYRLSRYGQLSTKEIAAQLSLSEQTVRNNISLTLHRLRAFL
QKDLLLIIFFFIIP
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atggacaagtttccagacaaccggctgatcgcgctcatcagggagaacaaccaactcgca
ttcaccgcactggtgaaccggtactgggaggggctgtacaggcatattcacgcaaggata
ggccatgaagaagatacaaaagacatcctgcaggaaattttcatctccgcctggaaaagc
agggaaacgatatacaccgatgctaacggtacaatagcctcttatcttttcaaagccgcc
cgttatgccatcatcaactatttcagccgtccgcagcaaaccatctgcaacgaggcgttg
ctggaaagcctcctgctgcaccagtccaccggctccgcactggaaatgctggaaacaaaa
gaactggagcaacaggtgatcgacgaactggaccgaatgccggaaagattgcagctcccc
taccgcctcagccgctacggccagctgtccaccaaggaaatagccgcacagctttcctta
tccgaacaaaccgtcaggaacaatatttcccttacgctgcaccgtttacgggctttcctg
caaaaagatcttttgctgatcatattcttcttcataattccttaa
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