Chitinophaga sp. XS-30: FW415_23140
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Entry
FW415_23140 CDS
T06207
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
chit
Chitinophaga sp. XS-30
Pathway
chit02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
chit00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FW415_23140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chit03021
]
FW415_23140
Transcription machinery [BR:
chit03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FW415_23140
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_28
HTH_23
DUF8494
GerE
HTH_10
Motif
Other DBs
NCBI-ProteinID:
QEH43590
LinkDB
All DBs
Position
complement(5755571..5756101)
Genome browser
AA seq
176 aa
AA seq
DB search
MSHSPDAQLVQRLKDGDLTAFDALFVKYYKMLCVNAYWFLQNDQEAKDLVQTFFMDIWDR
KLYLRFNESDIKGYLHMAVKNRCLNLLKQQKMQDVHHEAFTHLQQQDAEAPDYYNRLHTS
MKDLSGHKRMAVQMVYIQGKRYQEAAEEMGISINSLKTHLKRGLQFLRHAVHKIKE
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgagtcattctcccgatgcacaactggtgcagcgtctcaaggatggtgatttgaccgca
ttcgatgcgctcttcgtaaagtattataaaatgctttgcgtgaacgcgtattggttcctg
caaaacgaccaggaggccaaagatcttgtgcagaccttcttcatggatatctgggacaga
aaactctacctccggttcaatgaaagcgatatcaaaggatacctgcacatggccgtgaag
aaccgatgcctcaacctgctgaaacagcagaaaatgcaggacgtgcatcacgaggccttc
acccacctgcagcagcaggacgcggaggcgccggattattacaaccgccttcatacctcc
atgaaggacctctccggccacaaaagaatggccgtacagatggtgtacatacaaggcaaa
agataccaggaagcagcggaggaaatgggcatcagcatcaattcgttaaagacccacctg
aaacggggattgcagtttttgcggcatgcagtgcataaaataaaagagtaa
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