Chitinophaga sp. XS-30: FW415_23980
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Entry
FW415_23980 CDS
T06207
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
chit
Chitinophaga sp. XS-30
Pathway
chit00470
D-Amino acid metabolism
chit00550
Peptidoglycan biosynthesis
chit01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
chit00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FW415_23980 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FW415_23980 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
chit01011
]
FW415_23980 (murD)
Enzymes [BR:
chit01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
FW415_23980 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
chit01011
]
Precursor biosynthesis
Amino acid ligase
FW415_23980 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD_N
MurD-like_N
UPF0228
PGK
Motif
Other DBs
NCBI-ProteinID:
QEH43748
UniProt:
A0A5B9WSW5
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All DBs
Position
5957985..5959319
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AA seq
444 aa
AA seq
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MKLVILGAGESGIGAALLGKKEGYDVFVSDGGQIKDIYKQELAVHHIPFEEGRHSWDIIL
GADEIVKSPGIPEKSELMKKVREYGVPVISEIELAWRFSKDKKIIAITGSNGKSTTTALT
YHIFKTAGLDAALVGNIGVSYARQVAIQPADYYIVEISSFQLDDIRDFKPDVAILLNITP
DHLDRYDYKMENYVASKFRIAMNQTKEDYFIYCKDDPEIRNYLEKKPIYSEPIPFSIMEH
LNEGGFIANDQVNIQVKDEPVIMSMYDLALKGKHNMYNSMAAGIAGRTMDIRKEKIRDSL
STFSGLEHRMEYVATVRGVDFINDSKATNVNSVWFALESMERPVVLIMGGVDKGNDYSAI
RELVREKVKAIICLGVDNRPIHEALSKDMEVMVNTDNMKDAVAAAFQMAEKGDVVLLSPA
CASFDLFRNYEERGRMFKETVREL
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
gtgaaactcgttatactcggcgccggggaaagcggcattggtgcggcccttttagggaaa
aaagaaggatacgacgtgtttgtatccgacggcggacagatcaaagatatttataaacag
gaactggcggtacatcacatccctttcgaagaaggacgccactcctgggatatcatactc
ggtgcggatgaaattgtgaagagcccgggcattccggaaaagtcggaattgatgaaaaag
gtgcgggaatacggcgttcccgtgatctcggagatagaactggcctggcgtttcagtaaa
gacaaaaagatcattgccatcacgggaagcaatggtaaaagcaccacaacggcgcttact
taccacatctttaaaacagccggactggatgccgcgctggtgggcaatatcggtgtcagt
tacgcccgccaggtagccatccagcctgccgattattatatcgtggagatcagcagcttt
cagctggacgatatacgtgatttcaaaccggatgttgccatcctgctgaatatcacaccg
gaccatctggaccgctacgattataaaatggagaactatgtggcgtcaaaattccgcata
gccatgaaccagacgaaagaagattatttcatttactgtaaagacgatccggagatcagg
aattacttagagaagaaacccatttattcagaaccaataccttttagcattatggaacat
ttgaacgaaggtggatttattgcgaacgaccaggtgaatatccaggtgaaagacgaaccg
gttattatgtcgatgtacgacctggcattaaaaggtaagcacaacatgtataattcaatg
gcagcaggaattgcaggccgcacgatggatatacggaaggaaaagatccgggacagcctc
agcaccttcagcgggctggagcaccggatggaatatgtagccaccgtgcgcggcgtggac
ttcataaacgacagcaaggctaccaatgtgaactccgtatggttcgcactggaaagtatg
gaacgcccggtggtgctgatcatgggcggagtggacaaaggcaacgactacagcgccatc
cgtgagctggtgcgcgagaaagtgaaagcgatcatttgcctgggggtggacaaccgcccg
atacacgaagccttgtccaaagacatggaggtaatggtgaatacggacaatatgaaagat
gccgtggcggctgctttccagatggccgaaaaaggtgacgtagtactgctctcccctgcc
tgcgcaagcttcgacctcttcaggaattatgaagaaagaggccgcatgttcaaggaaaca
gtaagagaactttaa
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